Pairwise Alignments

Query, 609 a.a., hemagglutinin/proteinase from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., peptidase M4 from Pseudomonas simiae WCS417

 Score = 88.2 bits (217), Expect = 5e-22
 Identities = 71/226 (31%), Positives = 101/226 (44%), Gaps = 33/226 (14%)

Query: 269 VNGAYSPLNDAHFFGKVVFDMYQQWLNTSPLTFQLTMRVHYGNNYENAFWDGRAMTFGDG 328
           V+ AY  L     F   VFD  +  ++ + +    T  VH+G NY NAFW+   M FGDG
Sbjct: 100 VDEAYDGLGATFDFFDEVFD--RNSIDDAGMALDAT--VHFGQNYNNAFWNSTQMVFGDG 155

Query: 329 ----YTRFYPLVDINVSAHEVSHGFTEQNSGLVYRDMSGGINEAFSDIAGEAAEYF---- 380
               + RF   V ++V  HE++HG TE  + L+Y + SG +NE+ SD+ G   + +    
Sbjct: 156 DGQLFNRF--TVALDVIGHELAHGVTEDEAKLMYFNQSGALNESLSDVFGSLIKQYALKQ 213

Query: 381 MRGNVDWIVGADIF--KSSG-GLRYFDQPS------------RDGRSIDHASQYYSGIDV 425
              + DW++G  +F  K  G  LR    P             + G   D    Y     V
Sbjct: 214 RAEDADWLIGKGLFTQKIKGTALRSMKAPGTAFDDKLLGKDPQPGHMDDFVQTYEDNGGV 273

Query: 426 HHSSGVFNRAFYLLANKSG---WNVRKGFEVFAVANQLYWTPNSTF 468
           H +SG+ N AFY +A   G   W  R G   +         PNS F
Sbjct: 274 HINSGIPNHAFYQVATILGGFAWE-RAGRIWYDALRDARLRPNSGF 318