Pairwise Alignments

Query, 609 a.a., hemagglutinin/proteinase from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., Protease PrtS from Pseudomonas sp. DMC3

 Score =  100 bits (248), Expect = 1e-25
 Identities = 62/167 (37%), Positives = 83/167 (49%), Gaps = 25/167 (14%)

Query: 301 FQLTMRVHYGNNYENAFWDGRAMTFGDG----YTRFYPLVDINVSAHEVSHGFTEQNSGL 356
           F L   VHYG  YENAFW+G  M FGDG    + RF   +D  V  HE++HG TE  +GL
Sbjct: 125 FALIGSVHYGQGYENAFWNGAQMVFGDGDGEIFQRFTRSLD--VIGHELAHGVTESEAGL 182

Query: 357 VYRDMSGGINEAFSDIAGEAAEYFMRG----NVDWIVGADIF-----------KSSGGLR 401
           +Y + SG +NE+ SD+ G   + +  G      DW++GAD+             S  G  
Sbjct: 183 IYANQSGALNESLSDVFGVLIKQYTLGQTAEQADWLIGADLLMPQIQGKGLRSMSHPGTA 242

Query: 402 YFDQPSRDGRSIDHASQYYSGID----VHHSSGVFNRAFYLLANKSG 444
           Y D         DH  ++    +    VH +SG+ NRAFYL A   G
Sbjct: 243 YDDTMLGKDPQPDHMRKFVITSEDNGGVHINSGIPNRAFYLAARAFG 289