Pairwise Alignments

Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., Chemotaxis regulator BdlA from Alteromonas macleodii MIT1002

 Score =  306 bits (783), Expect = 1e-87
 Identities = 170/392 (43%), Positives = 240/392 (61%), Gaps = 1/392 (0%)

Query: 32  FDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQQFWTSLAQGKSHSGT 91
           + T G    A+P+ L+ + Y     T   H            QY+ FW  L  G S S T
Sbjct: 38  YSTDGQCTFASPVLLSILDYPNSTATSFSHAAMRVEGVEPESQYKSFWQHLVNGGSFSDT 97

Query: 92  FMRYKKDGSLLVLEATYFPIKTDGKVSSVMKIASDVTEQYLHAESQRDLLTALNQNFAVI 151
             R    G    L+A+Y  +   G V+ +  I  D+TE      + + +  ALN++ AVI
Sbjct: 98  VARKSALGETKWLKASYVAVNKHG-VTEIHAIYHDITEHENAYFAGKAVTDALNKSMAVI 156

Query: 152 EFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDEFYQQHPTFWKSLAAGQAYSGRF 211
           EF PDGTII+AN  F  T+ YSL  I+GKHHR+FC D+FYQ++P FW +LA G   SG+F
Sbjct: 157 EFHPDGTIITANENFTATVKYSLADIQGKHHRMFCRDKFYQENPNFWDNLARGNFSSGQF 216

Query: 212 LRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDITAEVLREQQVTDAANIAYSTSVET 271
            R +++G+ +W++A+Y+PV D + +V K++KFAS+IT  +  +  +  AA +A ST+ ET
Sbjct: 217 ERVDAHGNALWLEATYNPVFDASGRVVKVIKFASNITDAINEKNAIAQAAELAVSTAEET 276

Query: 272 SQVAQGGNHVLQDSVRLAEKMVGNIEQSLQQIEQLVVLSKDVSEIVKTISGIADQTNLLA 331
           SQ+A  G   LQ SV +    +  +EQ+ Q + +L   S  +  IV TISGIA+QTNLLA
Sbjct: 277 SQIAHEGASSLQRSVEIFNTAMLEVEQTNQLMHELSEQSLKIETIVTTISGIAEQTNLLA 336

Query: 332 LNAAIEAARAGEQGRGFAVVADEVRQLASRTSKATEEINQVVNKNLSLTEAVTSSISQVS 391
           LNAAIEAARAG+QGRGFAVVADEVRQLA RTS +T EI  VV +N  L +  T  ++ V 
Sbjct: 337 LNAAIEAARAGDQGRGFAVVADEVRQLAQRTSDSTVEIESVVAENRKLADKSTKKMAGVK 396

Query: 392 QIANETNGRIVEVSTIMEQIYQGAENVSSAVS 423
              ++ + +I +V +I+++I +GA NVS  VS
Sbjct: 397 DSVDQNSQQIAQVQSIIDEIQKGALNVSETVS 428



 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 3/112 (2%)

Query: 19  IVQSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQQF 78
           +  +L++ +A IEF   G +I+AN  F   V Y L ++ GKHHR+FC   +   Q+   F
Sbjct: 145 VTDALNKSMAVIEFHPDGTIITANENFTATVKYSLADIQGKHHRMFC--RDKFYQENPNF 202

Query: 79  WTSLAQGKSHSGTFMRYKKDGSLLVLEATYFPI-KTDGKVSSVMKIASDVTE 129
           W +LA+G   SG F R    G+ L LEATY P+    G+V  V+K AS++T+
Sbjct: 203 WDNLARGNFSSGQFERVDAHGNALWLEATYNPVFDASGRVVKVIKFASNITD 254