Pairwise Alignments

Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58

 Score =  256 bits (655), Expect = 1e-72
 Identities = 155/490 (31%), Positives = 245/490 (50%), Gaps = 84/490 (17%)

Query: 19  IVQSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQQF 78
           ++ +LS+  A IEFD SG +++AN  F  A+GY L E+ GKHH +F  PA  +S  Y+ F
Sbjct: 13  VLAALSKSQAMIEFDLSGRILTANDNFCRALGYELSEIIGKHHSMFVEPAFVKSADYKAF 72

Query: 79  WTSLAQGKSHSGTFMRYKKDGSLLVLEATYFPIKTDGKVSSVMKIASDVTEQYLHAESQR 138
           W  LA G      + R  K G  + +EA+Y P+   GK   V+KIA+D+T Q L      
Sbjct: 73  WAKLAAGNFDQQQYKRIGKGGKEVWIEASYNPVMRRGKPVKVVKIATDITAQKLKVAEDA 132

Query: 139 DLLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDEFYQQHP--- 195
             + AL++  A+IEF P G +++AN  FL  +GYSL +I+GKHH +FC +  Y   P   
Sbjct: 133 GKIEALSRAQAIIEFTPTGDVLTANENFLSALGYSLSEIQGKHHSMFC-EPSYTASPDYR 191

Query: 196 TFWKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDITAEVLREQ 255
            FWK LA G   +  F+R    G +V+IQASY+P+ D N +V+K+VKFA+D+T  V   +
Sbjct: 192 NFWKMLAGGDLMADEFMRLGKGGRKVFIQASYNPIFDMNGRVFKVVKFATDVTTRVENVE 251

Query: 256 QV----------------------------------TDAANIAYSTSVETSQVAQGGNHV 281
           Q+                                  +D    A +T  + ++    G+  
Sbjct: 252 QLAGCLNSLADGDLAQQIEKPFIPSLERLRTDFNAASDKLKRAMATVADNARAISAGSSE 311

Query: 282 LQ----DSVRLAEKMVGNIEQSLQQIEQLVVLSKD------------------------- 312
           ++    +  +  E+   ++E++   +E++    KD                         
Sbjct: 312 IRTAADELAKRTEQQAASVEETAAALEEITTTVKDSSRRAEEAGQLVARTREHAEHSGEV 371

Query: 313 -----------------VSEIVKTISGIADQTNLLALNAAIEAARAGEQGRGFAVVADEV 355
                            +S I+  I  IA QTN LALNA +EAARAGE G+GFAVVA EV
Sbjct: 372 VRDAIGAMDQIETSSREISNIIGVIDEIAFQTNHLALNAGVEAARAGEAGKGFAVVAQEV 431

Query: 356 RQLASRTSKATEEINQVVNKNLSLTEAVTSSISQVSQIANETNGRIVEVSTIMEQIYQGA 415
           R+LA R++KA +EI  ++  + S  ++  S +++      E   ++ +++T +  I + A
Sbjct: 432 RELAQRSAKAAKEIKTLITSSGSQVQSGVSLVTKAGSALQEIATQVHDINTNVVAIVEAA 491

Query: 416 ENVSSAVSQL 425
              S+A+ ++
Sbjct: 492 REQSNALGEI 501