Pairwise Alignments

Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., sensory methylation accepting chemotaxis protein from Agrobacterium fabrum C58

 Score =  231 bits (590), Expect = 3e-65
 Identities = 154/496 (31%), Positives = 246/496 (49%), Gaps = 89/496 (17%)

Query: 19  IVQSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQQF 78
           ++ +LS   A IEFD +G ++ AN  F  AVGY+  E+ G+ H IF S  +  S +Y+ F
Sbjct: 14  VLDALSRSQAIIEFDLTGKILKANDNFCKAVGYQPSEIVGRTHSIFLSSEDAASPEYKAF 73

Query: 79  WTSLAQGKSHSGTFMRYKKDGSLLVLEATYFPIKTDGKVSSVMKIASDVTEQYLHAESQR 138
           W  L++G+   G + R  K+G  + +EA+Y P+   GK   V+KIA+D+T     +    
Sbjct: 74  WAKLSRGEYDQGQYRRQAKNGDEIWIEASYNPVFRFGKPYKVVKIATDITVIKRKSAEDD 133

Query: 139 DLLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDEF--YQQHPT 196
             L AL++  A+IEF PDG I+ AN  FL T+ Y+ ++I GKHH +FC   +   Q +  
Sbjct: 134 GKLAALSRAQAMIEFTPDGKILGANENFLTTLDYTAEEIIGKHHSIFCEPAYAQSQDYRD 193

Query: 197 FWKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDITAEVLREQQ 256
           FWK L  G   +G+F+R      +V+IQASY+P+ D   +V+K+VKFA D+T  V   ++
Sbjct: 194 FWKELGRGHFSTGQFMRLGKDNKRVFIQASYNPIIDDRGRVFKVVKFAFDVTDRVHAVEE 253

Query: 257 VTDA------ANIA-----------------YSTSV------------ETSQVAQGGNHV 281
           +  A       NI                  ++ S+            +T  + +    V
Sbjct: 254 LGAALERLSQCNIRVTLDKPFVGEFERLRQDFNKSIAEFQKTLENVLGQTGDLTRSSQEV 313

Query: 282 LQDSVRLAEK--------------------MVGNIEQSLQQIEQLV-------VLSKDV- 313
            + SV LAE+                     V +  +++++  +LV       V S +V 
Sbjct: 314 SEASVNLAERSREQAVALEETSAALEEITATVRSSTENMKETRKLVQSARASTVASTEVV 373

Query: 314 -------------SEIVKTISGIAD----QTNLLALNAAIEAARAGEQGRGFAVVADEVR 356
                        S  +  I G+ D    QTNLLALNA +EAARAG+ G+GFAVVA EVR
Sbjct: 374 ERTVDAMQRIETASREISQIIGVIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEVR 433

Query: 357 QLASRTSKATEEINQVVN-------KNLSLTEAVTSSISQVSQIANETNGRIVEVSTIME 409
           +LA R++ A +EI  ++N       + + L      ++ Q+  +    +G +  +S   +
Sbjct: 434 ELAQRSASAAKEIKALINNSGTEVLEGVRLVGETGEALKQIDSLVRHIDGNVDTISKAAD 493

Query: 410 QIYQGAENVSSAVSQL 425
           +   G   ++ AV++L
Sbjct: 494 EQAAGISEINKAVNRL 509