Pairwise Alignments

Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58

 Score =  258 bits (659), Expect = 3e-73
 Identities = 152/489 (31%), Positives = 248/489 (50%), Gaps = 82/489 (16%)

Query: 19  IVQSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQQF 78
           ++ +LS+  A IEFD SG +++AN  F  A+GY L E+ G+HH +F  P+   S  Y+ F
Sbjct: 13  VLAALSKSQAIIEFDLSGKILTANESFCRAIGYELAEIVGRHHSLFVEPSVVSSPDYKAF 72

Query: 79  WTSLAQGKSHSGTFMRYKKDGSLLVLEATYFPIKTDGKVSSVMKIASDVTEQYLHAESQR 138
           W+ LA G+     + R  K G  + +EA+Y P+   G+   V+KIA+D+TE+ L A    
Sbjct: 73  WSKLASGQFDQRQYKRIGKGGREVWIEASYNPVFRRGRPVKVVKIATDITERKLRAAEDA 132

Query: 139 DLLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDEFYQ--QHPT 196
             + AL++  A+IEF P+G +++AN  FL  +GYSL +++G+HH +FC   + Q  ++  
Sbjct: 133 GKIDALSRAQAIIEFSPEGEVLTANDNFLAALGYSLSEVQGRHHSMFCDPAYTQSSEYKQ 192

Query: 197 FWKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDITAEV----- 251
           FW+ LA G   +  F+R    G +V+IQASY+P+ D N KV+K+VKFA+D+T  V     
Sbjct: 193 FWQRLAGGDLVADEFMRLGKGGRKVFIQASYNPIFDMNGKVFKVVKFATDVTGRVENVET 252

Query: 252 -------LREQQVTDAANIAYSTSVE-----------------------TSQVAQGGNHV 281
                  L E  +  + +  +  S+E                          ++ G N +
Sbjct: 253 LAQCLNDLAEGDLAQSIDKPFIPSLERLRTDFNAASEKLKRAMTLVSENAGAISSGSNEI 312

Query: 282 ---LQDSVRLAEKMVGNIEQSLQQIEQLVVLSKD-------------------------- 312
                D  +  E+   +IE++   +E++     D                          
Sbjct: 313 RSAADDLAKRTEQQAASIEETAAALEEITTAVNDSSRRADEAGKIVARARDHAEHSGQVV 372

Query: 313 ----------------VSEIVKTISGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVR 356
                           +S I+  I  IA QTNLLALNA +EAARAGE G+GFAVVA EVR
Sbjct: 373 RDAISAMDQIEKSSREISNIIGVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVR 432

Query: 357 QLASRTSKATEEINQVVNKNLSLTEAVTSSISQVSQIANETNGRIVEVSTIMEQIYQGAE 416
           +LA R++ A +EI  ++N + +  E     +++      E   ++ +++T +  I + A 
Sbjct: 433 ELAQRSATAAKEIKSLINASGAQVENGVGLVTRAGSALQEIAEQVRDINTNVVAIVEAAR 492

Query: 417 NVSSAVSQL 425
             S+A++++
Sbjct: 493 EQSTALAEI 501