Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., Long-chain fatty acid transport protein from Xanthobacter sp. DMC5

 Score =  127 bits (320), Expect = 5e-34
 Identities = 102/380 (26%), Positives = 172/380 (45%), Gaps = 25/380 (6%)

Query: 8   AVAISALIAGQVS-AAGFQVAEHSASGLGRAFSGEAAVADNASVLARNPAAMMLFETAQF 66
           A+AI   +A   + A GF + E S+   G +F+G AA  D  + +  NPAA+        
Sbjct: 25  AIAIPVALASSAAHAGGFGLREQSSYYQGTSFAGTAAGGDGLASMFWNPAAISFNPGLSV 84

Query: 67  SGALSIVDPEVNVDDLS----------NNQSMKDVAPLQIVPAAYYIRPINDQWAWGLAM 116
            G ++ + P  ++D  S           N  + D+     +P  ++     D+WA G  +
Sbjct: 85  EGNVTYIAPHASIDVFSATAPITGTSLGNVGVSDMVDNGTLP-TFFATYAWDRWAIGFGV 143

Query: 117 FTTYGVATDYPNEIYAGDLAGDTSLISVNLNPNIAYRVNPELSLGFGLDLVAAKAKLTRH 176
            + YG+ TD P           +S+  +N   ++AY++   +++G GL++    AKLT  
Sbjct: 144 TSPYGLVTDAPCSWSGRYYGCYSSIFDMNAQLSVAYKLTDWMTIGGGLNVNYINAKLTN- 202

Query: 177 KGGLAPFMGGGNPSDNLIG-MTGETLALGWNIGALYELDEQNRIGFGYRSRVKLNFDDGE 235
               A F G   P++NL   + G+ +  G N+G L+ L     +G GY+S++     +G 
Sbjct: 203 ----AQFAGFAPPTNNLYAQVNGDDIGYGINLGVLFTLAPGTTLGIGYKSQISQTL-NGM 257

Query: 236 FSSYDSGIATSAVVPGQLKIELPAIWELSGFHQLNEQWAVHYSYQQTDWSSFEELTATSS 295
                + I     V     + LP     S   +L+ QW V  + + T+WS+ +ELT  + 
Sbjct: 258 LDVSVANIVPVKSVNATAGLTLPDQITASFRSKLDAQWTVLGTVEWTNWSTVQELTVKAY 317

Query: 296 QCKNGTCFQKIEQYQDNGRWSVGATYTLNTTWTLRAGLAFD-EQAGKATLS--IPDSDRF 352
                T      Q+ D   +S G  Y  +    LRAG+ ++      +T S  +PD++RF
Sbjct: 318 GLPVSTLDL---QWNDGWFFSGGVEYQWDPKLALRAGIGYELTPVPDSTRSPRLPDTNRF 374

Query: 353 WYSAGLTYTLTPQLTMDAGF 372
           W S G TY  T Q + D  +
Sbjct: 375 WLSGGFTYNFTQQFSADFAY 394