Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., Long-chain fatty acid transport protein from Pseudomonas simiae WCS417

 Score =  183 bits (464), Expect = 1e-50
 Identities = 115/432 (26%), Positives = 203/432 (46%), Gaps = 27/432 (6%)

Query: 1   MLYKSSLAVAISALIAGQVSAAGFQVAEHSASGLGRAFSGEAAVADNASVLARNPAAMML 60
           ++ K++L++A+ A+ +  + A+GF + E   +G+G  F+G ++ A+NAS +  NPA M  
Sbjct: 4   VMLKTTLSLAV-AMASSHIFASGFALNEQDVAGMGTGFAGRSSSAENASTVYGNPAGMAR 62

Query: 61  FETAQFSGALSIVDPEVNVDDLSNNQS---MKDVAPLQIVPAAYYIRPINDQWAWGLAMF 117
            E  Q +G ++ +D   N+ D+S   S     D+ P   VP  +Y   +NDQWA G  ++
Sbjct: 63  LEGQQVTGGVAAIDASSNIKDVSGRSSGTNKGDMVPFTAVPFGFYTNKLNDQWAVGFGVY 122

Query: 118 TTYGVATDYPNEIYAGDLAGDTSLISVNLNPNIAYRVNPELSLGFGLDLVAAKAKLTRHK 177
             +G+ TDY +          + +  +   P ++Y  N  +S+GFG  +      L    
Sbjct: 123 APFGLVTDYESGFQGKAFGSKSEVTVITFQPTVSYAFNDRVSIGFGPTINRIAGTLESDI 182

Query: 178 GGLAPFMGGGNPSDNLIGMTGETLALGWNIGALYELDEQNRIGFGYRSRVKLNFDDGEFS 237
               P  G G+   N I + G+  A+G+N G L +  +  R+G  Y S+VK   +     
Sbjct: 183 N--LPVAGTGS---NNIKIKGDDTAVGFNAGLLVQATDTTRVGLTYHSKVKYKLEGHTEV 237

Query: 238 SYDSGIATSAVVPGQ----LKIELPAIWELSGFHQLNEQWAVHYSYQQTDWSSFEELT-- 291
           +  + +  S +  G+    LKI+ P  W+LS    +++ W ++     T WS  +++T  
Sbjct: 238 TKGTNVPASLLNNGRYDASLKIDTPESWDLSVTQDMSDAWKLYAGATWTRWSRLKDITVN 297

Query: 292 --ATSSQCKNGTCFQKI-------EQYQDNGRWSVGATYTLNTTWTLRAGLAFDEQAGKA 342
               S+   +G    +I       + + D   ++VG +Y +     LR GL FD+     
Sbjct: 298 NEGVSAAAGSGVLAPQIVGTIKEDQNWHDTWAYAVGTSYRVTKQVVLRTGLTFDQSPTNN 357

Query: 343 T---LSIPDSDRFWYSAGLTYTLTPQLTMDAGFALVQSRKGSFTEKNQIGQNLQFESEAV 399
           T     IP  DR  +S GL Y + P +T+D  ++ ++         N +GQ+   + E  
Sbjct: 358 TDRSPRIPTGDRTIFSLGLGYDVMPNMTVDLAYSYLKEEPVKVARANALGQSYNAKYENS 417

Query: 400 AYISALQFNYRF 411
           A    L   Y+F
Sbjct: 418 ANGFGLGVTYKF 429