Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  120 bits (302), Expect = 7e-32
 Identities = 114/477 (23%), Positives = 212/477 (44%), Gaps = 78/477 (16%)

Query: 7   LAVAISALIAGQVSAAGFQVAEHSASGLGRAFSGEAAVADNASVLARNPAAMMLFE--TA 64
           LA+   A+      A GF    + A G GRAF+G +   ++ S    NPAAM   E   A
Sbjct: 14  LALMGGAMATAPAQAGGFSTPTYGAPGWGRAFAGGSLFKNDPSSAYNNPAAMAFVEHNVA 73

Query: 65  QFSGALSIVD-------------------------PEVNVDDLSNNQSMKDVAPLQIVPA 99
           QF+   + +                          P+     ++NN   +      + P 
Sbjct: 74  QFTVDYARIKIKYKGDASDYAGNPISNTPLDANGFPDGTATTVNNNDGGQGGFTAWL-PT 132

Query: 100 AYYIRPINDQWAWGLAMFTTYGVATDYPNEIYAGDLAGDTSLISVNLNPNIAYRVNPELS 159
            + + P+ D++A+GL+     G+ + +       D A DT + +V L  +++++VN + S
Sbjct: 133 GFMVMPLGDRFAFGLSQVVPQGMRSTWDENSKLRDFAVDTKIETVGLTGSLSFKVNDQFS 192

Query: 160 LGFGLDLVAAKAKLTRHKGGLA------PFMGGGN-PSD---NLIGMTGETLALGWNIGA 209
           +G G+ +  +K  ++++   L+        +GG N PSD    L+ +  + ++ GW  G 
Sbjct: 193 IGGGVIVQHSKGFVSQNVDLLSAAAVSDSVLGGINFPSDVGHALMRVKVDNISAGWFTGV 252

Query: 210 LYELDEQNRIGFGYRSRVKLNFDDGEFSSY----------------DSGIATSAVVPG-- 251
           +++  E++ +G  Y +++K N   G+++ Y                 SG   +   PG  
Sbjct: 253 VWKPTERDTLGLNYHAKIK-NKMTGKYNIYADQFSYNLMTQPSPFGGSGTLVNTAYPGLE 311

Query: 252 --------QLKIELPAIWELSGFHQLNEQWAVHYSYQQTDWSSFEELTATSSQCKNGTCF 303
                    +++++PA   L   HQ N+++ +  S   T+WSSF++LT  S     GT  
Sbjct: 312 LAPDGAHASVQLDIPATAGLDWVHQFNDRFTLGASVTWTEWSSFKDLTLNS----GGTTI 367

Query: 304 QKIE-QYQDNGRWSVGATYTLNTTWTLRAGLAFDEQAGKATL---SIPDSDRFWYSAGLT 359
             I   Y++   +S+G  Y +    TLRAG+A D+   + +     IPD DR + S G  
Sbjct: 368 VSIPYNYKNTWMYSLGGDYRVTDELTLRAGVALDQTPTRNSTRDPRIPDGDRTFLSLGAG 427

Query: 360 YTL--TPQLTMDAGFA--LVQSRKGSFTEKNQI-GQNLQFESEAVAYISALQFNYRF 411
           Y +     L++D  ++   VQ  K      +++ G +L  ++E+   + ++   Y F
Sbjct: 428 YDVKAIKGLSVDLAYSHQFVQEVKLKTQNVDRLGGASLNGKAESSGDVVSVSATYAF 484