Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., aromatic hydrocarbon degradation protein from Vibrio cholerae E7946 ATCC 55056

 Score =  258 bits (658), Expect = 3e-73
 Identities = 160/436 (36%), Positives = 233/436 (53%), Gaps = 42/436 (9%)

Query: 6   SLAVAIS-ALIAGQVSAAGFQVAEHSASGLGRAFSGEAAVADNASVLARNPAAMMLFETA 64
           S AVA   A ++    AAGFQ+AE+SA+GLGRA++GEAA+ADNAS   RNPA +   E  
Sbjct: 9   SCAVAFGLASVSTFTQAAGFQLAEYSATGLGRAYAGEAAMADNASAQWRNPAMLTYLEGT 68

Query: 65  QFSGALSIVDPEVNVDDLSN-------NQSMKDVAPLQIVPAAYYIRPINDQWAWGLAMF 117
           Q S     V+P V+V+   N       + S  D A   ++P  Y    +N+Q A G A+ 
Sbjct: 69  QVSAGAIYVNPNVDVEGTVNHAQLGKTHASSNDFAHDAVIPNFYLSHQLNEQMALGFALG 128

Query: 118 TTYGVATDYPNEIYAGDLAGDTSLISVNLNPNIAYRVNPELSLGFGLDLVAAKAKLTRHK 177
           T YG+ TD   E  A       S+IS   N NIAY++ P+LS+G G+  V  +     H 
Sbjct: 129 TNYGMETDLGTEFAASHFGNQASVISKEANLNIAYQILPQLSIGGGVRYVMGEG----HF 184

Query: 178 GGLAPFMG-GGNPSDN----------LIGMTGETLALGWNIGALYELDEQNRIGFGYRSR 226
           G  AP      +P  N          L  M GE  + GW +G+ +++++ +R+GF Y+S 
Sbjct: 185 GATAPAKNLIRHPVTNNVMTLPKGTTLKYMEGEDNSWGWQVGSAWQINQDHRVGFAYKSE 244

Query: 227 VKLNFDDGEFSSYDSGIATSAVVPGQLKIELPAIWELSGFHQLNEQWAVHYSYQQTDWSS 286
           V ++F+      +  G++  +  PG + + LPA  EL+ FHQLN+QWA+H S   TDWSS
Sbjct: 245 VVMDFE-----GHAEGVSYGSYKPGMMSVTLPATAELASFHQLNDQWAIHASINWTDWSS 299

Query: 287 FEELTATSSQCKNGTCFQKIEQYQDNGRWSVGATYTLNTTWTLRAGLAFDEQA---GKAT 343
           F+ELTA   +  +     K E ++DN R+++G TY  +    LRAG+A+D  A      T
Sbjct: 300 FKELTAVFPEKSD---LIKSENWEDNYRFALGTTYQYDAKLALRAGVAYDTSAVDDKNRT 356

Query: 344 LSIPDSDRFWYSAGLTYTLTPQLTMDAGFALVQSRKGSFTEKNQ--------IGQNLQFE 395
            +IP++DR W S G +Y  TPQLT+DAGF  + ++  +  E           IG      
Sbjct: 357 ATIPETDRTWVSVGGSYVATPQLTLDAGFTYIFAKDATINEPRDASDQTAAAIGGAFTGN 416

Query: 396 SEAVAYISALQFNYRF 411
                ++  +Q NYRF
Sbjct: 417 VSGNVWLIGVQANYRF 432