Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., aromatic hydrocarbon degradation membrane protein from Sphingobium sp. HT1-2

 Score =  127 bits (318), Expect = 8e-34
 Identities = 102/387 (26%), Positives = 174/387 (44%), Gaps = 31/387 (8%)

Query: 8   AVAISALIAGQVSAAGFQVAEHSASGLGRAFSGEAAVADNASVLARNPAAMMLFETAQFS 67
           AVA   L     SA  F + E S+ G GRAFSGE A       L  NPAA+   E     
Sbjct: 14  AVAAGLLAPQAASAQAFYLQEQSSRGAGRAFSGEVA-DQGVQSLWWNPAAIAGMEGVDAH 72

Query: 68  GALSIVDPEVNVDDLSN--------------NQSMKDVAPLQIVPAAYYIRPINDQWAWG 113
            A+S++ P+ +VD+++               +Q  +D     ++P+      +  + A G
Sbjct: 73  QAVSVILPKGSVDNVNTLIVRPGQSAAAVGGSQRSRDPINNGVLPSGAIAVGLTSRLALG 132

Query: 114 LAMFTTYGVATDYPNEIYAGDLAGDTSLISVNLNPNIAYRVNPELSLGFGLDLVAAKAKL 173
           L + + Y   T+Y  + +A   A  T L + ++ P+IAY V P LS+G  L++  A A L
Sbjct: 133 LTVASPYSFTTNYDADSWARYSADKTKLRTYDIQPSIAYLVTPNLSIGAALNIEYADASL 192

Query: 174 TRHKGGLAPFMGGGNPSDNLIGMTGETLALGWNIGALYELDEQNRIGFGYRSRVKLNFDD 233
           + +   L+P +  G+       + G    LGW+ G  Y      ++G  Y+S VK N D 
Sbjct: 193 SNYLPNLSPLLADGHQE-----LKGNGWDLGWSAGLQYRAGPM-QLGASYKSSVKHNLDG 246

Query: 234 GEFSSYDSG--IATSAVVPGQLKIELPAIWELSGFHQLNEQWAVHYSYQQTDWSSFEELT 291
              ++   G     ++VV      E P          ++ +  ++    +  WS F+ + 
Sbjct: 247 SVTTTGLLGPLAGQNSVVNANATFETPWQAIFGARVAVSPKVTLNGQVTRMGWSKFDAIR 306

Query: 292 ATSSQCKNGTCFQKIEQYQDNGRWSVGATYTLNTTWTLRAGLAFDE---QAGKATLSIPD 348
             +            E Y+D   ++ G  Y +   WT+RAG+   +   + G     +PD
Sbjct: 307 LGAP-----LNVSIPENYRDTWSFAGGIDYAVTPAWTVRAGVQHAQTPTRNGNRDARVPD 361

Query: 349 SDRFWYSAGLTYTLTPQLTMDAGFALV 375
           S+R+ ++AG +Y ++ + T+DAG A +
Sbjct: 362 SNRWNFAAGTSYAVSSRFTLDAGAAYI 388