Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., hypothetical protein from Methylophilus sp. DMC18

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 70/305 (22%), Positives = 125/305 (40%), Gaps = 22/305 (7%)

Query: 41  EAAVADNASVLARNPAAMMLFETAQFSGALSIV-DPEVNVDDLSNNQSMKDVAPLQIVPA 99
           + AVA + S L  NPA ++  ++ QF    S++    +   D  N+Q   +   L  +  
Sbjct: 45  DTAVARDTSALNTNPAGLVQIKSKQFDAYGSVLRTTHLEQVDARNDQHADNRYTL--LAG 102

Query: 100 AYYIRPIND-QWAWGLAMFTTYGVATDYPN-EIYAGDLAGDTSLISV-NLNPNIAYRVNP 156
             Y + + D     G+  FT  G    + +     G      SL  +  + P +A +VN 
Sbjct: 103 GGYAQALEDLPCTAGIGFFTQGGAGAVFKHINTPFGTNDEMYSLFGIAKITPGMACQVND 162

Query: 157 ELSLGFGLDLVAAKAKLTRHKGGLAPFMGGGNPSDNLIGMTGETLALGWNIGALYELDEQ 216
            LS+G  L +  A  K         P +  G  +        +T+  G+ +G  Y LDEQ
Sbjct: 163 RLSVGAVLSINYASIKQGFFYNTSVPNVFSGFKNKG-----ADTIRPGFKVGVQYRLDEQ 217

Query: 217 NRIGFGYRSRVKLNFDDGEFSSYDSGIATSAVVPGQLKIE---LPAIWELSGFHQLNEQW 273
             +GF Y  + +L    G  +S  +  A+  V    L I+   LP    +    + +++W
Sbjct: 218 WTLGFSYTEKTELPLTGG--TSLVNNGASGVVRYRDLSIKGFALPREVAIGAAFKPDDRW 275

Query: 274 AVHYSYQQTDWS-SFEELTATSSQCKNGTCFQKI-----EQYQDNGRWSVGATYTLNTTW 327
            +        WS + +++T T     N +   ++     + + D   +++GA Y  +   
Sbjct: 276 LLSAKINWIQWSDAIKDVTTTWQDPDNSSAASQLRTVNPQNWHDQLVYALGAAYRYDDKT 335

Query: 328 TLRAG 332
           TL AG
Sbjct: 336 TLYAG 340