Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., Long-chain fatty acid transport protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  298 bits (763), Expect = 2e-85
 Identities = 172/436 (39%), Positives = 247/436 (56%), Gaps = 37/436 (8%)

Query: 4   KSSLAVAISALIAGQVSAAGFQVAEHSASGLGRAFSGEAAVADNASVLARNPAAMMLFET 63
           KS+LAVA+ A+I+ Q  +AGFQ+ E S+SGLGRA+SGE A+AD+A  ++RNPA + +F+ 
Sbjct: 9   KSALAVAV-AIISTQAWSAGFQLNEFSSSGLGRAYSGEGAIADDAGNVSRNPALITMFDR 67

Query: 64  AQFSGALSIVDPEVNVDDLSNNQSMKD---VAPLQIVPAAYYIRPINDQWAWGLAMFTTY 120
             FS     +DP+VN+   S ++   D   +AP   VP  +++ PINDQ+ WG ++ + Y
Sbjct: 68  PTFSAGAVYIDPDVNISGTSPSRRTLDADNIAPTAWVPNVHFVAPINDQFGWGASITSNY 127

Query: 121 GVATDYPNEIYAGDLAGDTSLISVNLNPNIAYRVNPELSLGFGLDLVAAKAKLTRHKGGL 180
           G+AT++ +    G + G T L ++NLN + AYR+N   S G G D V A+AK+ R  G L
Sbjct: 128 GLATEFNDTYAGGSVGGTTDLETMNLNLSGAYRLNEAWSFGLGFDAVYARAKIERFAGDL 187

Query: 181 APFMGGGN----------PSDNLIG-MTGETLALGWNIGALYELDEQNRIGFGYRSRVKL 229
              +   N          PSD  I  + G     GWN G LYELD+ NR    YRS VK+
Sbjct: 188 GQLVAAQNPALAPVAGQIPSDTKIAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKI 247

Query: 230 NFDDGEFSS--------YDSGIATS---AVVPGQLKIELPAIWELSGFHQLNEQWAVHYS 278
           +F  G +SS        ++  I T+   A   G L + LP +WE+SG++++  QWA+HYS
Sbjct: 248 DF-KGNYSSDLPIAINRFNLPIPTATGGATQSGYLTLNLPEMWEVSGYNRVAPQWAIHYS 306

Query: 279 YQQTDWSSFEELTATSSQCKNGTCFQKIEQYQDNGRWSVGATYTLNTTWTLRAGLAFDEQ 338
              T WS F+EL A S+     T F+K E ++D  R ++G TY  +  WT R G+AFD+ 
Sbjct: 307 LAYTSWSQFQELKAKST--AGDTLFEKHEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDS 364

Query: 339 ---AGKATLSIPDSDRFWYSAGLTYTLTPQLTMDAGFALVQSRKGSFTEKNQIGQNLQFE 395
              A   ++SIPD DRFW SAG TY      ++D G + +  +     E        QFE
Sbjct: 365 PVPAQNRSISIPDQDRFWLSAGTTYAFNKDASVDVGVSYMHGQSVKINE-----GPYQFE 419

Query: 396 SEAVAYISALQFNYRF 411
           SE  A++    FNY F
Sbjct: 420 SEGKAWLFGTNFNYAF 435