Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., 47 kDa outer membrane protein from Azospirillum sp. SherDot2

 Score =  166 bits (419), Expect = 2e-45
 Identities = 120/395 (30%), Positives = 195/395 (49%), Gaps = 25/395 (6%)

Query: 2   LYKSSLAVAISALIAGQVSAAGFQVAEHSASGLGRAFSGEAAVAD-NASVLARNPAAMML 60
           L  ++ A+ ++A  A    AAGF + E S SG G A++G  A  + +AS +  NPA M L
Sbjct: 10  LLTAAAAITVTAATASTAFAAGFALKEQSVSGQGTAYAGVTAGGNGDASSMFYNPATMGL 69

Query: 61  FETAQFSGALSIVDPEVNVDDLSNNQSMK-------------DVAPLQIVPAAYYIRPIN 107
               +     + V  +  VD  S N++ +             D+A   +VPA Y++  I+
Sbjct: 70  VTGIEAVQTATGVIVKSKVDSASANRARRLGGTSIGGNASPGDIAQDALVPAGYFVYSID 129

Query: 108 DQWAWGLAMFTTYGVATDYPNEIYAGDLAGDTS-LISVNLNPNIAYRVNPELSLGFGLDL 166
           D    G++    +G+ TDY  + + G   G  S L + N  P+++YR+NP ++LG G+ +
Sbjct: 130 DDLKVGISANGPWGLVTDY-GDSWIGRYHGIRSDLRTYNFAPSVSYRINPMITLGGGVQI 188

Query: 167 VAAKAKLTRHKGGLAPFMGGGNPSDNLIGMTGETLALGWNIGALYELDEQNRIGFGYRSR 226
             AKAKL++     A  +G     D    +TG+    G+ +GAL E  +  R+G  YRS 
Sbjct: 189 QYAKAKLSQSSDFGASRLGRPGSLDVKSDVTGDDWGWGFTLGALIEPVKGTRVGLAYRSA 248

Query: 227 VKLNFDDGEFSSYDSGIATSAVVPGQ---LKIELPAIWELSGFHQLNEQWAVHYSYQQTD 283
           VK     G  S        +  +P Q     +  P I  +  +H++N++WAV    Q T+
Sbjct: 249 VKHTL-TGSISFTGLPAPLAGALPAQSASADLTTPDIASIGLYHEVNDRWAVMADVQWTN 307

Query: 284 WSSFEELTATSSQCKNGTCFQKIEQYQDNGRWSVGATYTLNTTWTLRAGLAFDE---QAG 340
           WS F EL    +     +  +  E ++D   +++G +Y +    TLRAG+AFD+      
Sbjct: 308 WSRFRELRVNIANPALNSVTE--EHWKDTWYYALGTSYKVTDKLTLRAGVAFDQGSVDVE 365

Query: 341 KATLSIPDSDRFWYSAGLTYTLTPQLTMDAGFALV 375
             T  IP+ +R+W SAG  Y +T  L +DA ++ V
Sbjct: 366 YRTPRIPEQNRYWLSAGAGYQVTDNLRVDAAYSHV 400