Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., Outer membrane flp protein from Alteromonas macleodii MIT1002

 Score =  254 bits (648), Expect = 5e-72
 Identities = 154/449 (34%), Positives = 244/449 (54%), Gaps = 45/449 (10%)

Query: 4   KSSLAVAISALIAGQVSAAGFQVAEHSASGLGRAFSGEAAVADNASVLARNPAAMMLFET 63
           ++S+ +A++ L +    AAGFQV EHSA+GLGRA +G+AA  +NAS+LA NPAA+ +F+ 
Sbjct: 8   RASVCLALATLASSSALAAGFQVNEHSANGLGRAMAGQAAKPENASILATNPAAIGVFKE 67

Query: 64  AQFSGALSIVDPEVNVDDLSN--------NQSM----KDVAPLQIVPAAYYIRPINDQWA 111
           A+FS ++S +DP V++D + +         Q M     ++A    VP  +Y+ PIN++ +
Sbjct: 68  AEFSASVSFIDPNVDIDGVVSYALGEAPVGQPMPAAEDNIADTAFVPGFFYVSPINEKLS 127

Query: 112 WGLAMFTTYGVATDYPNEIYAGDLAGDTSLISVNLNPNIAYRVNPELSLGFGLDLVAAKA 171
            G+ +FTTYG+ +DY ++  A   A    + +V LNP ++Y+VN +L +GFGL++  A+A
Sbjct: 128 AGVGVFTTYGLRSDYSDDFGALHFADTAEVKTVTLNPAVSYKVNKQLMVGFGLNITYAEA 187

Query: 172 K--------LTRHKGGLAP-------FMGGGNPSDNLIGMTGETLALGWNIGALYELDEQ 216
           +        L     GLAP        +    P ++L  M G+    GWN G  ++  + 
Sbjct: 188 EIGSGVSNTLAGTVAGLAPTAEALGITLPTLTPGNSLFSMEGDDWGYGWNAGIFWQPTDM 247

Query: 217 NRIGFGYRSRVKLNFDDGEFSSYDSGIATSAVVPGQLKIELPAIWELSGFHQLNEQWAVH 276
             +   YR+  KL   +G  SS       +   PG L + L AI EL+   +++ QW+V 
Sbjct: 248 TNVALSYRAETKLEL-EGAVSSETPVFPINLNQPGSLDLNLAAITELAIDQKIDNQWSVQ 306

Query: 277 YSYQQTDWSSFEELTATSSQCKNGTCFQ-KIEQYQDNGRWSVGATYTLNTTWTLRAGLAF 335
            S   TDWS+FE+L A     ++G  F  K E + D+ R ++G TY LN   TLRAG A+
Sbjct: 307 ASVTFTDWSTFEKLEA---NLEDGIDFLIKEENFDDSWRAALGVTYILNDEITLRAGYAY 363

Query: 336 DE---QAGKATLSIPDSDRFWYSAGLTYTLTPQLTMDAGFALVQSRKGSFTEKNQI---- 388
           D+        +LSIPD+DR W+S G+TYT++   ++D  +  +  R+ +  +   I    
Sbjct: 364 DDGVVSVENRSLSIPDTDRHWFSGGMTYTVSEDTSIDVAYVFIDGREANIDKDRTILSNV 423

Query: 389 ------GQNLQFESEAVAYISALQFNYRF 411
                   N      A A+I ++Q N RF
Sbjct: 424 LPGTDFTTNFSGTQSATAHILSVQMNTRF 452