Pairwise Alignments

Query, 690 a.a., alpha-amylase from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., alpha-amylase family glycosyl hydrolase from Variovorax sp. OAS795

 Score = 82.0 bits (201), Expect = 7e-20
 Identities = 125/522 (23%), Positives = 177/522 (33%), Gaps = 143/522 (27%)

Query: 243 GDLKGVIAKLDHIQSLGTDAIWLSPIVEQVHGFVGGGEKGSFPFYAYHGYWTRDFTKIDA 302
           GDL G+ A+LDH+ SLG DA+W+SP+                   A  GY   DF  ID 
Sbjct: 29  GDLDGIRARLDHLVSLGVDAVWISPVYPSP--------------MADFGYDISDFCGIDP 74

Query: 303 NFGKDEDLQTLVREAHRRGIKILMDAVINHAGYATLADLQQDAVQVVNAPMLPER-WNDW 361
            FG  E    LVR+AH +G+K+++D V NH      +D     VQ  +A   P R W  W
Sbjct: 75  QFGTLESFDALVRDAHAKGLKLILDFVPNHT-----SDRHPWFVQSRSARSDPRRDWYIW 129

Query: 362 KPSADENWHSFHQAIDYQSKNW-QQWWGPDWVRAGLPGYPAPGSSDITMNLAGLPDFRTE 420
           +  A                NW   + GP W        PA G       L   PD    
Sbjct: 130 RDPAPGGG---------PPNNWLSNFGGPAWTFD-----PATGQYYGHSFLKEQPDLNWR 175

Query: 421 SPQAVTPPQWLLNNPGTRVVSKPNYTVADYLIEWQSDWVRRFGIDGFRIDTVKHV----- 475
           +P                 V    Y V  +       W+RR G+DGFR+D +  +     
Sbjct: 176 NPD----------------VRAAMYEVLRF-------WLRR-GVDGFRVDVLSQIIKDAE 211

Query: 476 -----------EGE----VWQRL--------------KQRATESLAAWRKDNNQSGEPFW 506
                      EG+     W  L               +R  ++ +  R      GE + 
Sbjct: 212 FRDNPPNPDFAEGQDPFFRWSMLYNTDLPELQPIVAEMRRVVDAFSDARSSRVLIGELYL 271

Query: 507 MMGEVWGHGAYRSPYFDDGFDALINFDIQKRMDNGAACLSQMAMVYRDYAQTLAKYPDFN 566
            +  +  +    +    +G     NF +       A    Q+    RDY   L      N
Sbjct: 272 PLPRLVAYYGLNAEGVLEGVQLPFNFQLIATEWQAA----QIDRFVRDYEAALPAGAQPN 327

Query: 567 PVSYMSSHDTELFFGRFKSLDMQRNAANALLLTPGAIQVYYGDEVAREAGPYADD----- 621
            V  + +HD      R     M R AA  LL   G   +YYGDE+     P   D     
Sbjct: 328 WV--LGNHDKSRIASRV-GPRMARLAAMLLLTLRGTPTLYYGDEIGMTDVPIPADEVQDP 384

Query: 622 ------------------------FHQGTRSDMPW-----EW---NAERQ-----ALLKH 644
                                    H G  S  PW     +W   N E Q     ++L  
Sbjct: 385 FEKNKPGMGLGRDPERTPMQWSAREHAGFTSAAPWLRLAPDWPTNNVESQSRDAGSMLAL 444

Query: 645 WQTLGQFRQRHPAIGTGEHREI-AQSNAYVFTRTLGEDKVVV 685
           ++ L   R+  PA+  G H  +  +     + R     ++VV
Sbjct: 445 YRRLIALRRAQPALHRGTHEALGTEGEVLAYARNCEGRRLVV 486