Pairwise Alignments

Query, 690 a.a., alpha-amylase from Vibrio cholerae E7946 ATCC 55056

Subject, 675 a.a., Periplasmic alpha-amylase (EC 3.2.1.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  556 bits (1433), Expect = e-162
 Identities = 302/702 (43%), Positives = 419/702 (59%), Gaps = 40/702 (5%)

Query: 1   MKLNALTLSLLSALALPALASPASTANLTVATTTNSRDFPLQADEPLVIPLTKGDYTLTI 60
           MKL A  L+L+  +A+   AS  ++      +T  +  F   A       LTKG   LT+
Sbjct: 1   MKLAAFALTLIPGIAI---ASSWTSPGFPTFSTQETGRFTSHA------ALTKGTRALTL 51

Query: 61  SGIGGDCPPVPEQEIKFNTPIALNCHVPTQLPLSIRFTGDYAFQWQAQNNTLTFVRQTTK 120
             I   C   P   IK N  ++L           +   GDY      ++ T T +     
Sbjct: 52  H-IDQQCWQ-PSGAIKLNQMLSLKPCEGAPPQWRLFKDGDYTITVDTRSGTPTLLL---- 105

Query: 121 AAKTEFHRPIPNV-SCEVYQGGEVTLDLASSFADGTELQDAMTGQVVTIEQGKVRLTPSA 179
           + KTE  R       C V+ G  +TLD+  +F +GT ++D  +GQ  T++ G++ L P A
Sbjct: 106 SIKTEPERTAQLAYQCPVWDGSPLTLDVRQTFPEGTVVRDYYSGQTDTVQNGQITLQP-A 164

Query: 180 NSGGLVLLEPKQTAKAEPKQPFTYRNANIYFVMVDRFYNADPSNDGSYGRHKDGQEEIGT 239
           +S GL+LLE  +T       PF +RNA +YFV+ DRF N DP+ND SY RHKDG +EIGT
Sbjct: 165 DSHGLLLLERAET---HAPAPFNWRNATVYFVLTDRFRNGDPTNDHSYSRHKDGMQEIGT 221

Query: 240 FHGGDLKGVIAKLDHIQSLGTDAIWLSPIVEQVHGFVGGGEKGSFPFYAYHGYWTRDFTK 299
           FHGGDL+G+ ++LD++Q LG +A+W+S   EQ+HG+VGGG KG FP YAYHGY+T+D+T 
Sbjct: 222 FHGGDLRGLTSQLDYLQQLGVNALWISSPFEQIHGWVGGGTKGDFPHYAYHGYYTQDWTT 281

Query: 300 IDANFGKDEDLQTLVREAHRRGIKILMDAVINHAGYATLADLQQ---DAVQVVNA---PM 353
           +DAN G + DL+ LV  AH+RGI+IL D V+NHAGYATLAD+Q+    A+ +  A    +
Sbjct: 282 LDANMGSEADLRALVDGAHQRGIRILFDVVMNHAGYATLADMQEYQFGALYLSGAERQKI 341

Query: 354 LPERWNDWKPSADENWHSFHQAIDY-QSKNWQQWWGPDWVRAGLPGYPAPGSSDITMNLA 412
           L +RW +W+P+A ++WHSF+  I++  S  W++WWG  W+R  +  Y +PG  D+T++LA
Sbjct: 342 LGDRWTNWRPAAGQSWHSFNDYINFSDSAAWEKWWGKKWIRTDIGDYDSPGFDDLTLSLA 401

Query: 413 GLPDFRTESPQAVTPPQWLLNNPGTRVVSKPNYTVADYLIEWQSDWVRRFGIDGFRIDTV 472
            LPD +TES      P +  N P T+      YT  DYL  W S WV  +GIDGFR+DT 
Sbjct: 402 FLPDIKTESTTPSGLPAFYANKPDTKAKFIEGYTPRDYLTHWLSQWVHDYGIDGFRVDTA 461

Query: 473 KHVEGEVWQRLKQRATESLAAWRK---DNNQSGEPFWMMGEVWGHGAYRSPYFDDGFDAL 529
           K+VE   WQ+LK +A+ +L  W++   D      PFWM GE WGHG  +S Y+  GFDA+
Sbjct: 462 KNVELPAWQQLKTQASAALREWKQANPDKALDNSPFWMTGEAWGHGVMKSDYYRYGFDAM 521

Query: 530 INFDIQKRMDNGAACLSQMAMVYRDYAQTLAKYPDFNPVSYMSSHDTELFFGRFKSLDMQ 589
           INFD Q++      CL++M  V++   Q   K  DFN +SY+SSHDT LF       +  
Sbjct: 522 INFDYQEQAAKAVDCLAEMGPVWQ---QMTDKMQDFNVLSYLSSHDTRLF------REGG 572

Query: 590 RNAANALLLTPGAIQVYYGDEVAREAGPYADDFHQGTRSDMPW-EWNAERQALLKHWQTL 648
             AA  LLL+PGA+Q++YGDE AR  GP   D  QGTRSDM W + + +  A + HWQ +
Sbjct: 573 DKAAELLLLSPGAVQIFYGDESARPFGPTGSDPLQGTRSDMNWQDVSGKSAAAVAHWQRI 632

Query: 649 GQFRQRHPAIGTGEHREIAQSNAYVFTRTLGEDKVVVAFVGR 690
            QFR RHPAIG G+   +   + Y F R  G+D V+V + GR
Sbjct: 633 SQFRARHPAIGAGQQTTLTLKHGYGFVRQYGDDTVMVVWAGR 674