Pairwise Alignments

Query, 690 a.a., alpha-amylase from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., periplasmic alpha-amylase precursor (NCBI) from Escherichia coli BW25113

 Score =  558 bits (1437), Expect = e-163
 Identities = 304/704 (43%), Positives = 412/704 (58%), Gaps = 43/704 (6%)

Query: 1   MKLNALTLSLLSALALPAL-ASPASTANLTVATTTNSRDFPLQADEPLVIPLTKGDYTLT 59
           MKL A  L+LL   A+ A   SP   A     T T    F   A  P      KG   LT
Sbjct: 1   MKLAACFLTLLPGFAVAASWTSPGFPAFSEQGTGT----FVSHAQLP------KGTRPLT 50

Query: 60  ISGIGGDCPPVPEQEIKFNTPIALNCHVPTQLPLSIRFTGDYAFQWQAQNNTLTFVRQTT 119
           ++     C   P   IK N  ++L     T     +   G+Y  Q   ++ T T +    
Sbjct: 51  LN-FDQQCWQ-PADAIKLNQMLSLQPCSNTPPQWRLFRDGEYTLQIDTRSGTPTLMISIQ 108

Query: 120 KAAKTEFHRPIPNV--SCEVYQGGEVTLDLASSFADGTELQDAMTGQVVTIEQGKVRLTP 177
            AA+     P+ ++   C  + G  +T+D++++F +G  ++D  + Q+  ++ G++ L P
Sbjct: 109 NAAE-----PVASLVRECPKWDGLPLTVDVSATFPEGAAVRDYYSQQIAIVKNGQIMLQP 163

Query: 178 SANSGGLVLLEPKQTAKAEPKQPFTYRNANIYFVMVDRFYNADPSNDGSYGRHKDGQEEI 237
           +A S GL+LLE  +T   +   PF + NA +YFV+ DRF N DPSND SYGRHKDG  EI
Sbjct: 164 AATSNGLLLLERAET---DTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEI 220

Query: 238 GTFHGGDLKGVIAKLDHIQSLGTDAIWLSPIVEQVHGFVGGGEKGSFPFYAYHGYWTRDF 297
           GTFHGGDL+G+  KLD++Q LG +A+W+S   EQ+HG+VGGG KG FP YAYHGY+T+D+
Sbjct: 221 GTFHGGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQDW 280

Query: 298 TKIDANFGKDEDLQTLVREAHRRGIKILMDAVINHAGYATLADLQQDAVQVVN------A 351
           T +DAN G + DL+TLV  AH+RGI+IL D V+NH GYATLAD+Q+     +        
Sbjct: 281 TNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEVK 340

Query: 352 PMLPERWNDWKPSADENWHSFHQAIDYQSK-NWQQWWGPDWVRAGLPGYPAPGSSDITMN 410
             L ERW+DWKP+A + WHSF+  I++  K  W +WWG +W+R  +  Y  PG  D+TM+
Sbjct: 341 KSLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMS 400

Query: 411 LAGLPDFRTESPQAVTPPQWLLNNPGTRVVSKPNYTVADYLIEWQSDWVRRFGIDGFRID 470
           LA LPD +TES  A   P +  N   T   +   YT  DYL  W S WVR +GIDGFR+D
Sbjct: 401 LAFLPDIKTESTTASGLPVFYKNKMDTHAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVD 460

Query: 471 TVKHVEGEVWQRLKQRATESLAAWRKDNNQSG---EPFWMMGEVWGHGAYRSPYFDDGFD 527
           T KHVE   WQ+LK  A+ +L  W+K N       +PFWM GE WGHG  +S Y+  GFD
Sbjct: 461 TAKHVELPAWQQLKTEASAALREWKKANPDKALDDKPFWMTGEAWGHGVMQSDYYRHGFD 520

Query: 528 ALINFDIQKRMDNGAACLSQMAMVYRDYAQTLAKYPDFNPVSYMSSHDTELFFGRFKSLD 587
           A+INFD Q++      CL+QM   ++  A+   K   FN +SY+SSHDT LF       +
Sbjct: 521 AMINFDYQEQAAKAVDCLAQMDTTWQQMAE---KLQGFNVLSYLSSHDTRLF------RE 571

Query: 588 MQRNAANALLLTPGAIQVYYGDEVAREAGPYADDFHQGTRSDMPW-EWNAERQALLKHWQ 646
               AA  LLL PGA+Q++YGDE +R  GP   D  QGTRSDM W + + +  A + HWQ
Sbjct: 572 GGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSAASVAHWQ 631

Query: 647 TLGQFRQRHPAIGTGEHREIAQSNAYVFTRTLGEDKVVVAFVGR 690
            + QFR RHPAIG G+   +     Y F R  G+DKV+V + G+
Sbjct: 632 KISQFRARHPAIGAGKQTTLLLKQGYGFVREHGDDKVLVVWAGQ 675