Pairwise Alignments

Query, 227 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  165 bits (417), Expect = 2e-45
 Identities = 88/219 (40%), Positives = 138/219 (63%), Gaps = 2/219 (0%)

Query: 1   MLHFQSIEKQYSLGVQSVPALRGVSGVVQQGEMLALCGPSGSGKSTLLNILGLLDPNYQG 60
           +L   ++ + Y  G + V  L+ +S  +  GEM+A+ G SGSGKSTL+NILG LD    G
Sbjct: 4   LLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSG 63

Query: 61  EVALEGR-VYPRKGKSAALLRRTQFGFVFQKFNLVSVMTALENVAYPLMLNGFSRRDQHK 119
              + GR V      + A LRR  FGF+FQ+++L+S +TA +NV  P +  G  R+ +  
Sbjct: 64  TYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQA 123

Query: 120 LAHDMLTKVGLEAVMQQRPDHLSGGQQQRVAIARALVHNPKLVVADEPTASLDSQTANLV 179
            A ++L ++GL   +   P  LSGGQQQRV+IARAL++  ++++ADEPT +LDS +   V
Sbjct: 124 RARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEV 183

Query: 180 ISLMKSLGHELGTTFVVATHDGRMAAQCDRTLNLVDGQI 218
           +++++ L  + G T ++ THD  +AAQ +R + + DG+I
Sbjct: 184 MAILRQL-RDRGHTVIIVTHDPLIAAQAERIIEIHDGKI 221