Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., Lipoprotein-releasing system transmembrane protein LolE from Xanthobacter sp. DMC5

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 81/337 (24%), Positives = 153/337 (45%), Gaps = 32/337 (9%)

Query: 77  PLANGLEGSDHIRQVLLANPAIRGIQPRIELTGLVSNGQKSTIFVGLGVDDKEFDMKG-P 135
           PL + L     +   + A   IR   P +E   L S+   ++  +  G+ +K  D++G P
Sbjct: 88  PLESPLTDYKAVAARIAALNGIRLAVPLVEGQALASSPFGASGVLVRGMAEK--DLRGLP 145

Query: 136 FL--DLRAGQTLQDPKSPRFDPTQPQVMLGVDLARNLSVGVGDWVTLLATTADGALNALD 193
            +  ++R G TL++     FD  Q  + +G  LA  LS+  GD +TL+A    GA+  + 
Sbjct: 146 SVAHNIRQG-TLEN-----FDQGQG-IAIGKRLADQLSLRAGDNITLVAPR--GAVTPMG 196

Query: 194 -------FQVRGLYSTGVPELDKRQLYLHLASAQELLN-SSKVSTLSVYLFNTENTQTLQ 245
                  +++  ++  G+ E D   +++ L  AQ   N +  V+ + VYL N ++   L+
Sbjct: 197 TSPRIKVYKIAAVFEVGMSEYDSAFVFMPLPEAQAYFNRNGDVNAIEVYLDNPDDVGELR 256

Query: 246 TWVENQLNQLSLSQELQVTPWQ-QLAFFYTRVKDLYDRLFGVMGTVMAMVVFVALFNTLT 304
             +     Q +  + + +  W+ + A F+  ++   + +F ++ T++ +V  + + + L 
Sbjct: 257 AAI-----QSAAERPVYLVDWRVRNATFFGALQVERNVMFLIL-TLIVLVAALNIVSGLI 310

Query: 305 MSVSERTREIGTLSALGAYPSDILAGFVREATLLALCGSLLGTLLTGITIVAVRVADI-Q 363
           M V ++  +I  L  +GA    I+  F      + + G+L G LL    IV + +  I Q
Sbjct: 311 MLVKDKGHDIAILRTMGATQGSIMRIFFITGASIGVVGTLSGLLLG--VIVCLNIESIRQ 368

Query: 364 MPPPPGRTEGYPLDLYFSFTLVGFCTLGTVLICVLAA 400
                  TE +  +LY+   L      G     VL A
Sbjct: 369 FISWLTSTELFSPELYYLSRLPAQMNFGETSSVVLMA 405