Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., Lipoprotein releasing system transmembrane protein LolC/LolE from Variovorax sp. SCN45

 Score = 71.2 bits (173), Expect = 5e-17
 Identities = 80/336 (23%), Positives = 140/336 (41%), Gaps = 36/336 (10%)

Query: 23  SLLSISI-IAIAVLALTSAGGFGLYTYDSLRESTARDVGHLTLSQRGYFAQEEETPLANG 81
           S+L I++ +A  ++ L+   GF       +R+     V H+ +  R              
Sbjct: 33  SMLGIALGVAALIIVLSVMNGF----QKEVRDRMLGVVSHIEIFSRD----------GQA 78

Query: 82  LEGSDHIRQVLLANPAIRGIQPRIELTGLVSNGQKSTIFVGLGVDDKEFDMKGPFLDLRA 141
           L   + I      +P + G  P I    L++ G+     V  G+D K        L+   
Sbjct: 79  LPQLEEIMAAARKHPEVIGAAPFINTQALIARGEDMKGTVVRGIDPK--------LEPEV 130

Query: 142 GQTLQDPKSPRFDPTQPQ---VMLGVDLARNLSVGVGDWVTLLA----TTADGALNAL-D 193
             T        FD   P    ++LG +LAR+L V  GD VTL+A     T  G +  L  
Sbjct: 131 TDTNSIAAHGTFDKLVPGEFGIVLGAELARSLFVQPGDKVTLVAPGGQVTPAGVVPRLKQ 190

Query: 194 FQVRGLYSTGVPELDKRQLYLHLASAQELLNSSKVSTLSVYLFNTENTQTLQTWVENQLN 253
           F V G + +G  E D     +H   A ++      + + + L +    +     V +QL 
Sbjct: 191 FTVVGTFDSGHYEYDSALAMVHEQDAAKVFRLEGPTGIRLKLKDLNEARD----VADQL- 245

Query: 254 QLSLSQELQVTPWQQLAFFYTRVKDLYDRLFGVMGTVMAMVVFVALFNTLTMSVSERTRE 313
            +SL  E  +  W +    +     +  R+  ++ T++  V    L +TL M+V+++  +
Sbjct: 246 AVSLPGEFLIRDWTRQNKTWFAAVQVEKRMMFIILTLIVAVAAFNLVSTLVMTVTDKRAD 305

Query: 314 IGTLSALGAYPSDILAGFVREATLLALCGSLLGTLL 349
           I  L  LG+ P  I+  FV +  ++ + G++ G LL
Sbjct: 306 IAILRTLGSSPRSIMGIFVVQGAMVGVIGTVAGLLL 341