Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., Macrolide export ATP-binding/permease protein MacB from Variovorax sp. SCN45

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 16/201 (7%)

Query: 219 AQELLNSSKVSTLSVYLFNTENTQTLQTWVENQLNQLSLSQELQVTPWQQLAFFYTRVKD 278
           A  L       +++V + + + T+  +  V   L     S++        +     R   
Sbjct: 481 ASRLFGQQHFDSITVRIRDDQPTKAAEDSVVKLLTMRHGSKDFFTFNMDSIVKTAERTSQ 540

Query: 279 LYDRLFGVMGTVMAMVVFVALFNTLTMSVSERTREIGTLSALGAYPSDILAGFVREATLL 338
               L  ++  +  +V  + + N + +SV+ERTREIG   A+GA  SD+L  F+ EA L+
Sbjct: 541 SLTLLLSLIAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARQSDVLQQFLTEAVLV 600

Query: 339 ALCGSLLG-TLLTGIT-IVAVRVADIQMPPPPGRTEGYPLDLYFSFTLVGFCTLGTVLIC 396
            L G L+G TL  GI+ + ++ V   QM               FS   V    L   LI 
Sbjct: 601 CLVGGLIGVTLSYGISFLFSLFVKQWQM--------------IFSMGAVVSAFLCASLIG 646

Query: 397 VLAAWFSARKGVNKPITEALA 417
           VL  +  AR        EALA
Sbjct: 647 VLFGYLPARNAARLDPIEALA 667