Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

 Score = 65.1 bits (157), Expect = 4e-15
 Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 26/210 (12%)

Query: 159 QVMLGVDLARNLSVGVGDWVTLLATTAD-----GAL-NALDFQVRGLYSTGVPELDKRQL 212
           Q+ LG  LAR+L+V VGD V L+ T A      G L +  +F V G+++TG  ++D + +
Sbjct: 148 QLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLGRLPSQRNFTVAGIFNTG-SDVDGQLM 206

Query: 213 YLHLASAQELLNSSKVSTLSVYLFNTENTQTLQTWVENQLNQLSLSQELQVTPWQQL--- 269
             HL  A +LL     +     LF  +       +V +QL +  L Q+ Q + W++    
Sbjct: 207 VTHLRDAAKLLRYDAQTISGWRLFFDD------PFVVSQLAEQPLPQDWQWSDWREQRGE 260

Query: 270 AFFYTRVKDLYDRLFGVMGTVMAMVVFVALFN---TLTMSVSERTREIGTLSALGAYPSD 326
            F   R++        +MG ++ ++V VA FN    L M V E+  E+  L   G     
Sbjct: 261 LFQAVRMEK------NMMGLMLGLIVGVAAFNIISALIMVVMEKQAEVAILKTQGMQSQH 314

Query: 327 ILAGFVREATLLALCGSLLGTLLTGITIVA 356
           +LA F+ +     + G+L+G LL G+ + A
Sbjct: 315 VLAIFMVQGASSGVIGALVGGLL-GVLLAA 343