Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 91/426 (21%), Positives = 168/426 (39%), Gaps = 56/426 (13%)

Query: 1   MGKLISQAWRLAALNLQRNRRRSLLSISIIAIAVLALTSAGGFGLYTYDSLRESTARDVG 60
           M  L+ Q+W+     L  +R +S+L+I+ I+  V+++      G   Y +  ES    + 
Sbjct: 1   MRLLLQQSWQ----TLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQ 56

Query: 61  HLTLSQRGYFAQE-EETPLANGLEGSDHIRQVLLANPAIRGIQPRIELTGLVSNGQKSTI 119
              +   G  ++  +  P    ++ ++ + + +   P I+      E   +    Q+ T 
Sbjct: 57  ETQMVASGQTSEVWQGMPARRPIQLTESLMREVAQRPEIQRYSIVYENREVSITQQRGTA 116

Query: 120 FVGL--GVDDKEFDMKGPFLDLRAGQ-TLQDPKSPRFDPTQPQVMLGVDLARNLSVGVGD 176
              +  GVD   F + G  L L +   +L D  + R        +LG  +A    + +GD
Sbjct: 117 IGSMVSGVDRGYFSLAGLKLTLGSRDFSLHDQHNHR-----RVAILGDHVAATSQLKIGD 171

Query: 177 WVTLLATTADGALNALDFQVRGLYSTGVPELDKRQLYLHLASAQELLNSSKVSTLSVYLF 236
                           +F++RG+    +  +D           Q++   S  ST      
Sbjct: 172 ----------------EFKIRGIAFRVIGIMDDESSRFSFGDNQKVFIPS--STFKDIWD 213

Query: 237 NTEN------TQTLQTWVENQLNQLSLSQELQVTPWQQLAFFY----------TRVKDLY 280
              N       Q + +W   +  + + +Q L  +P  Q A F           T +    
Sbjct: 214 TQPNMMLVLPAQGVSSWALREQLRHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGI 273

Query: 281 DRLFGVMGTVMAMVVFVALFNTLTMSVSERTREIGTLSALGAYPSDILAGFVREATLLAL 340
                  G +   V  + + N + ++V+ERTREIG   A+GA P  I   F+ E  LL +
Sbjct: 274 QAFLAASGMMTMAVGILGVANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVV 333

Query: 341 CGSLLGTLLTGITIVAVRVADIQMPPPPGRTEGYPLDLYFSFTLVGFCTLGTVLICVLAA 400
            G+L+G LL    ++ +    + +P   G       +   + T V    L T ++ + AA
Sbjct: 334 IGALVGLLLAYFGVLLLN--HLGLPTWLG-------EPVITSTTVWLSMLVTSILALAAA 384

Query: 401 WFSARK 406
           +F AR+
Sbjct: 385 YFPARR 390