Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., Lipoprotein releasing system transmembrane protein LolC/LolE from Sphingobium sp. HT1-2

 Score = 57.4 bits (137), Expect = 8e-13
 Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 41/283 (14%)

Query: 94  ANPAIRGIQPRIE--LTGLVSNGQKSTIFVGLGVDD--KEFDMKGPFL--DLRAGQTLQD 147
           A P +    P IE  L G      +  +  G+ V D      +KG  +  DL A      
Sbjct: 88  ATPGVTSATPLIEQPLLGSYQGRVEGVLVRGMTVPDIRSNTTLKGKIVAGDLNA------ 141

Query: 148 PKSPRFDPTQPQVMLGVDLARNLSVGVGDWVTLL-----ATTADGALNALDFQVRGLYST 202
                      +V +GV LA NL + VGD ++++     +T        + +QV  ++  
Sbjct: 142 -----LTANSEKVGIGVRLAENLGIQVGDHISIMNPAGRSTPFGTVPRQISYQVAAIFEV 196

Query: 203 GVPELDKRQLYLHLASAQELLN-SSKVSTLSVYLFNTENTQTLQTWVENQLNQLSLSQEL 261
           GV + DK  + + +  AQ LL     VS + V   N +   ++   +  ++   ++ Q+ 
Sbjct: 197 GVYDYDKAFVVMPIEDAQTLLLLGDVVSMIEVETVNADRVGSILEPLAAKVAGRAVVQD- 255

Query: 262 QVTPWQQLAFFYTRVKDLYDRLFG---VMGTVMAMVVFVALFNTLT---MSVSERTREIG 315
               W+Q+         L++ L      M  V++++V VA+FN L+   M V  +TR+I 
Sbjct: 256 ----WRQMN------ASLFEALAVERVAMFVVLSIIVLVAVFNILSSLIMLVRAKTRDIA 305

Query: 316 TLSALGAYPSDILAGFVREATLLALCGSLLGTLLTGITIVAVR 358
            L  +GA  S ++  F+     +   G + G +L G T +  R
Sbjct: 306 ILRTMGASRSGLVKIFMTVGVTIGTLGMVAGMVL-GFTFLFFR 347