Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., ABC-type antimicrobial peptide transport system, permease component from Sphingobium sp. HT1-2

 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 26/200 (13%)

Query: 228 VSTLSVYLFNTENTQTLQTWVENQLNQ-----LSLSQELQVTPWQQLAFFYTRVKDLYDR 282
           +S + V + +  ++ T+Q  +E  + +             V   +Q++   T    +  +
Sbjct: 218 ISQIMVAVDDAYDSATVQDSLEQLMRERRKIKAGAEDNFNVFDTKQISDTLTGTTTILTQ 277

Query: 283 LFGVMGTVMAMVVFVALFNTLTMSVSERTREIGTLSALGAYPSDILAGFVREATLLALCG 342
           +   +  +  +V  + + N + +SV+ERTREIG   A+GA   ++L  F+ EA +L+  G
Sbjct: 278 IVAAVAAISLLVGGIGIMNIMLVSVTERTREIGIRLAIGAVAREVLMQFLVEAIVLSCMG 337

Query: 343 SLLGTLLTGITIVAVRVADIQMPPPPGRTEGYPLDLYFSF----TLVGFCTLGTVLICVL 398
            L+G ++    I +V +A +   P             F+F     L+ F  L +  I V+
Sbjct: 338 GLIGLVIA--LIASVGIAPLMKVP-------------FTFDPQVNLIAF--LFSAAIGVV 380

Query: 399 AAWFSARKGVNKPITEALAY 418
             +F AR+  +    +AL +
Sbjct: 381 FGYFPARRAASLNPIDALRH 400