Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 667 a.a., Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 52.8 bits (125), Expect = 3e-11
 Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 5/166 (3%)

Query: 189 LNALDFQVRGLYST-----GVPELDKRQLYLHLASAQELLNSSKVSTLSVYLFNTENTQT 243
           +N L FQV G+ ST        + D   L  +  S   L     +  ++V + +      
Sbjct: 446 VNNLIFQVVGVMSTRGASPNGQDQDDVVLVPYATSQLRLSGQRFLRNVTVAVSDVSRIDE 505

Query: 244 LQTWVENQLNQLSLSQELQVTPWQQLAFFYTRVKDLYDRLFGVMGTVMAMVVFVALFNTL 303
            Q+ VE+ L +     + Q+     +    T  ++    L G +  +  +V  + + N +
Sbjct: 506 TQSAVESLLAERHGVIDFQIRNMASIIDTATETQNTMTILLGSIAAISLLVGGIGVMNIM 565

Query: 304 TMSVSERTREIGTLSALGAYPSDILAGFVREATLLALCGSLLGTLL 349
            +SV+ERTREIG   A GA   +IL  F+ EA +++  G L+G ++
Sbjct: 566 LVSVTERTREIGIRMATGARMRNILQQFLIEALVVSALGGLVGVVI 611