Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., lipoprotein-releasing system transmembrane subunit LolC from Magnetospirillum magneticum AMB-1

 Score = 53.9 bits (128), Expect = 9e-12
 Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 19/200 (9%)

Query: 160 VMLGVDLARNLSVGVGDWVTLLA----TTADGALNAL-DFQVRGLYSTGVPELDKRQLYL 214
           V++G  LA  L V +GD ++L++     TA G +  +  ++V G +  G+ E D   +++
Sbjct: 147 VVIGKRLADKLGVRIGDSISLISPKGNVTAFGTVPRMRGYRVVGTFDVGMFEYDSGFIFM 206

Query: 215 HLASAQELLN-SSKVSTLSVYLFNTENTQTLQTWVENQLNQLSLSQELQVTPWQQL-AFF 272
            L +AQ       +V+ + V+L N +     +  + +     +      +  WQQ  A F
Sbjct: 207 PLEAAQTYFRLPEQVTQIEVFLENPDMVPETRKAIWDLTGTTAT-----IYDWQQANANF 261

Query: 273 YTRVKDLYDRLFGVMGTVMAMVVFVALFN---TLTMSVSERTREIGTLSALGAYPSDILA 329
           +  ++   +R   VM  ++ +++ VA FN   +L M V ++ R+I  L  +GA    IL 
Sbjct: 262 FNAIQ--VER--NVMFLILTLIILVAAFNIISSLIMLVKDKGRDIAILRTMGATRGMILR 317

Query: 330 GFVREATLLALCGSLLGTLL 349
            F      + + G++ GT+L
Sbjct: 318 IFFLAGASVGVVGTVAGTVL 337