Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., Lipoprotein releasing system transmembrane protein LolE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 74.3 bits (181), Expect = 6e-18
 Identities = 103/426 (24%), Positives = 173/426 (40%), Gaps = 56/426 (13%)

Query: 11  LAALNLQRNRRR----SLLSISI-------IAIAVLALTSAGGFGLYTYDSLRESTARDV 59
           L  L   R RRR    SL+S+         +A+ ++ L++  GF        RE   R +
Sbjct: 8   LIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFE-------RELNNRIL 60

Query: 60  GHLTLSQRGYFAQEEETPLANGLEGSDHIRQVLLANPAIRGIQPRIELTGLVSNGQKSTI 119
             +   +     +    P  N  E    +++V    P I    P I  TGLV +G     
Sbjct: 61  AVVPHGE----IEAVNQPWTNWREALAKVQKV----PGIAAAAPYINFTGLVESGANLRA 112

Query: 120 FVGLGVDDKEFDMKGPFLDLRAGQTLQDPKSPRFDPTQPQVMLGVDLARNLSVGVGDWVT 179
               GVD K+               +Q+     F   + Q+++G  +A  L+V  GDWV+
Sbjct: 113 IQVKGVDPKQEQQLSALPSF-----VQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVS 167

Query: 180 LLATTADGALNALDFQVRGLYSTGV----PELDKRQLYLHLASAQELLN-SSKVSTLSVY 234
           ++   A+     L  +   L+  G+     +LD     + L  AQ+ L+  S VS +++ 
Sbjct: 168 IMIPNANADHKLLQPKRVRLHVIGILQLSGQLDHSFAMIPLEDAQQYLDMGSSVSGIALK 227

Query: 235 LFNTENTQTLQTWVENQLNQLSLSQELQVTPWQQLAFFYTRVKDLYDRLFGVMGTVMAMV 294
           + +  N   L        N       + +  W  +  +    +D+   +  +M   M +V
Sbjct: 228 VHDVFNANKLVRDAGEVTNSY-----VYIKSW--IGTYGYMYRDI-QMIRAIMYLAMILV 279

Query: 295 VFVALFN---TLTMSVSERTREIGTLSALGAYPSDILAGFVREATLLALCGSLLGTLLTG 351
           + VA FN   TL M+V +++ +I  L  LGA    I A FV    L  L GSL+G  + G
Sbjct: 280 IGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLLGSLIGVAI-G 338

Query: 352 ITIVAVRVADIQMPPPPGRTEGYPLDLYFSFTL--------VGFCTLGTVLICVLAAWFS 403
           + +     A I         +    D+YF   L        V +  +  +L+ +LA+W+ 
Sbjct: 339 VVVSLQLTAIINGIEKAIGHQFLSGDIYFIDFLPSELHWLDVVYVLVTALLLSLLASWYP 398

Query: 404 ARKGVN 409
           AR+  N
Sbjct: 399 ARRASN 404