Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., ABC transporter permease from Escherichia coli ECOR38

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 102/435 (23%), Positives = 168/435 (38%), Gaps = 60/435 (13%)

Query: 9   WRLAALNLQRNRRRSLLSISIIAIAVLALTSAGGFGLYTYDSLRESTARDVGHLTLSQRG 68
           WR+   +  RN RR +L+I  + +A   +++     +   D +         ++ +   G
Sbjct: 3   WRMLRQSWGRNLRRKVLAIITVFLASSLISALLAVSIDIGDKMSRELKSYGANILIEPAG 62

Query: 69  YFAQEEE-TPLANGLEGSDHIRQVLLANPAIRGIQPRIELTGLVS--NGQKSTIFVGLGV 125
             A     +  +N L G D + +  L N  I+ I  R  + G      G+ S     + +
Sbjct: 63  QAALPALFSESSNPLSGQDFLDEAELPN--IKDIFWRNNIVGFAPMLGGEASVEGEPVRI 120

Query: 126 DDKEFDMKGPFLDLRAGQTLQDPKSPRFDPT----------QPQVMLGVDLARNLSVGVG 175
               F       D    +T Q   SP +  T          +PQ ++G  LAR +    G
Sbjct: 121 LGTFFSQPVDIPDEEGYETGQKTVSPYWQVTGDWPQEPAGAEPQTLVGHALARQMGWKPG 180

Query: 176 DWVTLLATTADGALNALDFQVRGLYSTGVPELDKRQLYLHLASAQELLN------SSKVS 229
           D +TL     +G   A+   V G+ S+G  E    QL + L++ Q LL       + +VS
Sbjct: 181 DKLTL---RTEG--EAVQVTVSGILSSGGDE--DNQLVMPLSTVQHLLGLPGKVQAIRVS 233

Query: 230 TLSV----------YLFNTENTQTLQTW--------VENQLNQLSLSQELQVTPWQQLAF 271
            L+V             +  N +    W        + +QL +     E  V P  Q+A 
Sbjct: 234 ALTVPENELSRRARENLDALNAEEYDLWYCTAYVSSIAHQLEEAISGAE--VRPVWQVAA 291

Query: 272 FYTRVKDLYDRLFGVMGTVMAMVVFVALFNTLTMSVSERTREIGTLSALGAYPSDILAGF 331
               V D    L  V+     +   + + + +T ++ ER +EIG + ALGA    I+  F
Sbjct: 292 SEGVVIDKIQLLMAVVTVAALVASAMGIASLMTSTIMERAKEIGLMKALGARQWQIMLLF 351

Query: 332 VREATLLALCGSLLGTLLTGITIVAVRVADIQMPPPPGRTEGYPLDLYFSFTLVGFCTLG 391
             EA    L G  LG +       A+ V     P            L F++ +V    + 
Sbjct: 352 YLEAASSGLAGGALGCIAGWGLAKAIGVMLFDAP------------LNFAWIVVPCVLVI 399

Query: 392 TVLICVLAAWFSARK 406
            VLI ++  WF AR+
Sbjct: 400 AVLIALIGTWFPARR 414