Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., lipoprotein-releasing ABC transporter permease subunit LolC from Dickeya dianthicola ME23

 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 74/312 (23%), Positives = 129/312 (41%), Gaps = 38/312 (12%)

Query: 119 IFVGLGVDDKEFDMKGPFLDLRAGQTLQDPKSPRFDPTQPQVMLGVDLARNLSVGVGDWV 178
           + +G+  D++E     P  +      LQ     +  P Q QV+LG  LA  L V  GD +
Sbjct: 114 VMLGVNPDEQE-----PLANYLVNTHLQ-----QLQPGQYQVILGEQLASQLGVKTGDSL 163

Query: 179 TLLATTADGAL------NALDFQVRGLYSTGVPELDKRQLYLHLASAQELLNSSKVSTLS 232
            L+ T+A          +   F V G +S    E+D  QL ++   A  L+         
Sbjct: 164 RLMVTSASQLTPMGRVPSQRLFTVAGTFSAR-SEVDGYQLLVNQQDASRLMR-------- 214

Query: 233 VYLFNTENTQTLQTWVENQLNQLSLSQELQVTPWQQLAFFYTRVKDLYDRL---FGVMGT 289
              +   N    + W+   L   +LSQ+  + P  Q   +  R  +L+  +     +MG 
Sbjct: 215 ---YPLGNITGWRLWLNQPLTVDTLSQQ-ALPPGTQWKDWRERKGELFQAVRMEKNMMGL 270

Query: 290 VMAMVVFVALFNTLT---MSVSERTREIGTLSALGAYPSDILAGFVREATLLALCGSLLG 346
           +++++V VA FN +T   + V E+  E+  L   G     I+A F+ +     + G+L+G
Sbjct: 271 LLSLIVAVAAFNIITSLGLLVMEKQGEVAILQTQGLTRRQIMAVFMVQGGGAGVMGALVG 330

Query: 347 TLLTGITIVAVRVADIQMPPPPGRTEGYPLDLYFSFTLVGFCTLGTVLICVLAAWFSARK 406
            +L    +V     +  MP      +G  L +      V    L  +L+ +L+  + + +
Sbjct: 331 AIL---GMVLASQLNTLMPMLGLLIDGGALPVQIQLAQVIAIALVAMLLALLSTLYPSWR 387

Query: 407 GVNKPITEALAY 418
                  EAL Y
Sbjct: 388 AAATHPAEALRY 399