Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 40/196 (20%), Positives = 91/196 (46%), Gaps = 11/196 (5%)

Query: 160 VMLGVDLARNLSVGVGDWVTLLATTADGALNALD-----FQVRGLYSTGVPELDKRQLYL 214
           V++G  LA  L V  GD +TL++   D     ++     +++ G++  G+ E D   +Y+
Sbjct: 168 VLVGSRLASQLGVTAGDDITLISPEGDVTPMGINPRVKSYKISGVFEIGMSEYDASMIYM 227

Query: 215 HLASAQELLNSSK-VSTLSVYLFNTENTQTLQTWVENQLNQLSLSQELQVTPWQQLAFFY 273
            L+ AQ   N++  V ++ +Y+   ++   ++  VE      +  +++ +T W+Q    +
Sbjct: 228 PLSEAQLYFNANGIVQSIELYVSRPDDVDGIRPLVEQ-----AAERQIYITDWRQRNQTF 282

Query: 274 TRVKDLYDRLFGVMGTVMAMVVFVALFNTLTMSVSERTREIGTLSALGAYPSDILAGFVR 333
                +   +  ++ T++ +V  + + + L M V ++  +I  L  +GA    ++  F  
Sbjct: 283 FSALQVERNVMFMILTLIVLVAALNIISGLIMLVKDKGSDIAILRTMGASSGAVMRIFFM 342

Query: 334 EATLLALCGSLLGTLL 349
               +   G+  G  L
Sbjct: 343 TGAAIGTVGTFAGVAL 358