Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., LytTR family DNA-binding domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  111 bits (278), Expect = 1e-29
 Identities = 83/258 (32%), Positives = 135/258 (52%), Gaps = 37/258 (14%)

Query: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68
           ++ DDEPL R  L  LLAE    +E+V S  +G+  L A+++ QPD + LDI MP  DG+
Sbjct: 4   LVVDDEPLARARLTALLAEC-AEVEVVGSVGDGEATLAALDELQPDALLLDINMPGTDGV 62

Query: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128
            +A+RL  + + P V+F TAY+ +A+ AFE  A+DYLLKP+   RL    ++ Q++L   
Sbjct: 63  ALAQRLAGRAR-PQVIFCTAYEAHALKAFELGAVDYLLKPVRLDRLRDALQRAQRRLAD- 120

Query: 129 VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYKV 188
            AP    A L  +                   +GE++  IA++E++ + A++KY+ +   
Sbjct: 121 -APREPPAYLHGRL------------------RGEQVR-IALDEVICLLADEKYVVVQHR 160

Query: 189 HGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKI---------DKVTRDFGGKM 239
            G    E L+  SL++ L +  P+Q  ++HR+ +V   ++           + R  G ++
Sbjct: 161 RG----ELLIEESLRQ-LEETYPDQLIRLHRNCLVPPPRLLGLKTLADGRVLARLDGSEL 215

Query: 240 WVHIDRLQLPVSRALQHL 257
              I R  LP  R L  L
Sbjct: 216 NPEISRRNLPAVRKLLRL 233