Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., Transcriptional regulator protein from Variovorax sp. SCN45

 Score =  177 bits (449), Expect = 2e-49
 Identities = 111/283 (39%), Positives = 155/283 (54%), Gaps = 36/283 (12%)

Query: 5   TYTAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPK 64
           T TA++A+DEPLL   L   LA  WP L++VA+A +G+ A++   +  P V+F DIRMP 
Sbjct: 2   TPTALIAEDEPLLAQALKAELAAAWPELQVVATAGDGRSAVREALRLLPQVLFFDIRMPG 61

Query: 65  MDGIEVARRL-----LQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCE 119
           +DG+     L       Q  +P +VF+TAYDEYA  AFE  AIDY+LKP+   RL     
Sbjct: 62  LDGLGAVAELADCWPTDQAPMPQLVFVTAYDEYAARAFEAQAIDYVLKPVQPERLRKTVA 121

Query: 120 KLQQQLRRNVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEE--------------- 164
           +L+Q L    AP       ++  E L RT+    QV   A  G E               
Sbjct: 122 RLRQAL---AAPQPSATPAVAD-EALERTLAQWRQVLAAAGAGAETVAPPTAPLRMIAAS 177

Query: 165 ------IHLIAVNELLYVKAEDKYLSLYKVHGATTHEYLLRSSLKELLAQLDPNQFWQIH 218
                 + ++ V+E+LY +A DKYL +       THEYL+R+ LK+LL QLD + FWQ+H
Sbjct: 178 DAGGSTVRMVPVDEVLYFEAADKYLRVL----TATHEYLIRTPLKQLLPQLDADTFWQVH 233

Query: 219 RSIVVNVGKIDKVTRDFGGKMWVHIDRL--QLPVSRALQHLFK 259
           R++VV    I+ V RD  GKM + +     ++PVSR   HLF+
Sbjct: 234 RAVVVRSAAIESVHRDEAGKMHLILRGRPEKIPVSRLYAHLFR 276