Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., Two-component transcriptional response regulator, LuxR family from Sphingobium sp. HT1-2

 Score =  125 bits (315), Expect = 7e-34
 Identities = 75/262 (28%), Positives = 144/262 (54%), Gaps = 19/262 (7%)

Query: 5   TYTAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPK 64
           T   +L DDE L    L KL  +    +EI+ +  NG+ A++AI+ H+PD+VFLDI+MP 
Sbjct: 2   TIRTILVDDESLAIQGL-KLRLQAHEDVEIIETCTNGREAIRAIKTHKPDLVFLDIQMPG 60

Query: 65  MDGIEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQ 124
            DG  V + +++  + PL +F+TAY ++A+ AFE  A+DYL+KP+   RLA   ++++ +
Sbjct: 61  FDGFSVVQGMMEV-EPPLFIFVTAYSDHAIRAFEAQAVDYLMKPVDEGRLADALDRVRLR 119

Query: 125 L--RRNVAPSNDLAQLMSQFE----------QLTRTVKPQYQVWLKASKGEEIHLIAVNE 172
           L  ++ V  +  L +++++                    +++  +      +I  + V+ 
Sbjct: 120 LSEKKQVQEAEKLREVLAEVAPDAMHDFANGDEDAPASNRFEKLINIKDRGQIFRVDVDS 179

Query: 173 LLYVKAEDKYLSLYKVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVT 232
           +  + A   Y+ +Y       +  +LR ++K+L  +LDP  F ++HRS +VN+ ++ +V 
Sbjct: 180 IERIDAAGDYMCIY----TADNSLILRETMKDLEKRLDPRNFQRVHRSTIVNLSQVRQVK 235

Query: 233 RDFGGKMWVHIDR-LQLPVSRA 253
               G+ ++ ++   Q+ VSR+
Sbjct: 236 PHTNGECFLVLESGAQVKVSRS 257