Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., Two-component transcriptional response regulator, LuxR family from Sphingobium sp. HT1-2

 Score =  124 bits (311), Expect = 2e-33
 Identities = 82/262 (31%), Positives = 135/262 (51%), Gaps = 37/262 (14%)

Query: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68
           ++ DDEPL    L  L A   P + +V +A +G+ AL+ +E  +PD++ LDI MP +DGI
Sbjct: 6   MIVDDEPLAVERLQMLCARE-PRIALVGTANDGEAALRLVEALKPDLLLLDIAMPLLDGI 64

Query: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128
            VAR + Q    P ++F+TA++ +AV AF+  A+DYLLKP++  RL    ++++Q LR  
Sbjct: 65  GVARAISQMGIRPAIIFVTAFESFAVEAFDLAAVDYLLKPVAHDRLTRAVDRVEQALRSR 124

Query: 129 -------VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDK 181
                  +AP+    +   +F             W+      E+  IA +++  ++AE  
Sbjct: 125 DGEEDAPLAPAEPAPEWAEEF-------------WV--PHRSELVRIAADQIDRIEAERD 169

Query: 182 YLSLYKVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMW- 240
           Y+ L+       H YLL  ++  L  +LDP  F ++HRS +V    I ++  D G  +W 
Sbjct: 170 YMRLH----VGAHSYLLHQTISSLEERLDPQAFVRLHRSHIVRRPHIARLRHD-GSGVWF 224

Query: 241 --------VHIDRLQLPVSRAL 254
                   + I R  L  +RA+
Sbjct: 225 AALADGNEIRIGRTYLANARAM 246