Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., Positive alginate biosynthesis regulatory protein from Pseudomonas putida KT2440

 Score =  105 bits (262), Expect = 9e-28
 Identities = 81/247 (32%), Positives = 122/247 (49%), Gaps = 19/247 (7%)

Query: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68
           ++ DDEP  R  L +LL EL     +  SA NG  AL  IE  +PDVV LDI MP +DG+
Sbjct: 4   LIVDDEPQGRERLTRLLGELEGYTVLEPSATNGDEALALIESLKPDVVLLDIGMPGLDGL 63

Query: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128
           +VA RL ++   P VVF +  DEY   AF+   + ++ KP  +  L     K ++  R  
Sbjct: 64  QVAARLCEREAPPAVVFCSGDDEYGAEAFKDSTLSHVTKPFQAHALRDALRKAEKPNR-- 121

Query: 129 VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYKV 188
                  AQL +          P+  +  +  KG  I LI + +++Y  A+ KY++L   
Sbjct: 122 -------AQLAALTRPANEGGGPRSHISARTRKG--IELIPLPQVIYFIADHKYVTLRHE 172

Query: 189 HGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRLQ- 247
            G    E LL   LK L  +    +F +IHR+ +V   +I+++ R   G   +++  L  
Sbjct: 173 AG----EVLLDEPLKALEDEFG-ERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDG 227

Query: 248 --LPVSR 252
             L VSR
Sbjct: 228 DALTVSR 234