Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., DNA-binding response regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 22/244 (9%)

Query: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68
           ++ DDEPL    L   +  L   LE+V    N   A   ++Q   D++FLDI+MPK+ GI
Sbjct: 6   MIVDDEPLALDVLETFIQRL-DNLELVCRCNNAVEAYGCLQQEHIDLLFLDIQMPKLTGI 64

Query: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128
           +  R L   P V   +  TAY +YAV  FE +A+DYLLKP++  R      K+       
Sbjct: 65  DFLRSLAHPPHV---ILTTAYRDYAVEGFELNAVDYLLKPIAFERFLKAVSKV------- 114

Query: 129 VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYKV 188
            AP      + +           +  ++LKA K  ++  + ++++LY+++   Y+ +   
Sbjct: 115 AAPEQHKTVVAAAAPPTFAQDYKEAFIYLKADK--KMVKVMLSDILYIESLKDYIRV--- 169

Query: 189 HGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRLQL 248
               T E +    +  L  +L  ++F +IHRS +V + KI   +        V I + ++
Sbjct: 170 -KTETKEIISYQKISFLEEKLPTDKFLRIHRSFIVALDKIQAFSATA-----VDIGKAEV 223

Query: 249 PVSR 252
           P+ R
Sbjct: 224 PIGR 227