Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., LytTR family DNA-binding domain-containing protein from Pectobacterium carotovorum WPP14

 Score =  114 bits (285), Expect = 2e-30
 Identities = 72/255 (28%), Positives = 135/255 (52%), Gaps = 16/255 (6%)

Query: 8   AVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDG 67
           A++ +DE L +  L+ L+ +    + I A+ ++G   L+ ++ +  D +FLDI +P +DG
Sbjct: 3   AIIVEDEFLAQQELSYLIKQ-HSGITIAATFDDGLDVLKYLQHNDVDAIFLDINIPSLDG 61

Query: 68  IEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRR 127
           + +A+ + +    P ++FITAY E+AV AFE  A DY+LKP   SR+ +   KL+   ++
Sbjct: 62  VWLAQNISKFAHKPYIIFITAYKEHAVEAFEVEAFDYILKPYHESRIITMLRKLETTWQQ 121

Query: 128 NVAPSNDLAQLMSQFEQLTRTVKPQ-YQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLY 186
                    Q++   E  T+   P+  Q  +   K E I +  +N + Y  A++K   +Y
Sbjct: 122 R--------QMVPAVETGTQAGAPRGAQQTINLMKDERIIVTDINNIYYAAAQEKVTLVY 173

Query: 187 KVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRL 246
                   E+++  ++ E  ++L  + F++ HRS  VN+ KI ++   F     + ++ L
Sbjct: 174 ----TRREEFIMPMNITEFCSRLPEDYFFRCHRSYCVNLTKIREIVPWFNNTYILRLNDL 229

Query: 247 --QLPVSRALQHLFK 259
             ++PVSR+    F+
Sbjct: 230 DFEVPVSRSKIKAFR 244