Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., two component transcriptional regulator, LytTR family from Kangiella aquimarina DSM 16071

 Score =  140 bits (352), Expect = 3e-38
 Identities = 83/218 (38%), Positives = 124/218 (56%), Gaps = 30/218 (13%)

Query: 7   TAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMD 66
           + ++ DDE   R  L +LL E  P L+IV  A+NGQ AL+ IE+ QPD++FLDI MP M+
Sbjct: 3   SVLIVDDEQPARQRLRRLLGE-HPQLDIVGEADNGQTALELIERQQPDLIFLDISMPVMN 61

Query: 67  GIEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLR 126
           G++VA++L +QP  P ++F TAYDEYA+ AF+  A DYLLKP+   RL+   +KL++Q  
Sbjct: 62  GMQVAKQLNEQPHQPHIIFTTAYDEYALQAFDVDAQDYLLKPIRQERLSKALQKLKRQ-- 119

Query: 127 RNVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLY 186
                              T T K     +L   + E +  IA+ ++L++ ++ KY  ++
Sbjct: 120 -------------------TATAK---SAFLSIRERETVRRIAIEDILFLHSDQKYTEVH 157

Query: 187 KVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVN 224
                  +E LL S   + L Q   N F +IHRS +VN
Sbjct: 158 -----LANEVLLSSDSLKDLEQRFSNDFIRIHRSTLVN 190