Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., two component transcriptional regulator, LytTR family from Enterobacter asburiae PDN3

 Score =  106 bits (264), Expect = 5e-28
 Identities = 79/245 (32%), Positives = 130/245 (53%), Gaps = 23/245 (9%)

Query: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68
           ++ DDEPL R +L  LL E  P +EIV    N   A+ A+ + +PDV+FLDI+MP++ G+
Sbjct: 5   LIVDDEPLARENLRVLLQEQ-PDIEIVGECANAIEAIGAVHKLRPDVLFLDIQMPRISGL 63

Query: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128
           E+   +L     P +VF+TA+DEYAV AFE HA DYLLKP+   RL     +L+Q+  R 
Sbjct: 64  EMVG-MLDPAHRPYIVFLTAFDEYAVKAFEEHAFDYLLKPIEEKRLEKTLTRLRQE--RT 120

Query: 129 VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYKV 188
           V    D+  L    + L          ++  +    I+L+ ++++ +V +    LS   V
Sbjct: 121 V---QDVTLLPENQQPLK---------FIPCTGHSRIYLLQMDDVAFVSSR---LSGVFV 165

Query: 189 HGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRLQ- 247
             A  +E     +L+ L ++       + HR  +VN+  + ++  +  G+  + +   Q 
Sbjct: 166 TSAEGNEGFTELTLRTLESR---TPLIRCHRQYLVNMAHLKEIRLEDNGQAELVLRAGQT 222

Query: 248 LPVSR 252
           +PVSR
Sbjct: 223 VPVSR 227