Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., two-component system response regulator BtsR from Dickeya dianthicola ME23

 Score =  103 bits (257), Expect = 3e-27
 Identities = 79/247 (31%), Positives = 125/247 (50%), Gaps = 23/247 (9%)

Query: 7   TAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMD 66
           T ++ DDEPL R +L  LL E    LE+V    N   A+ AI +  PDVVFLDI+MP++ 
Sbjct: 3   TVLIVDDEPLARDNLRCLL-EQDDDLELVGECANAVEAIGAIHRLHPDVVFLDIQMPRIS 61

Query: 67  GIEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLR 126
           G+E+   ++    +P +VF TAYDEYA+ AFE  A DYLLKP+   RL      L ++  
Sbjct: 62  GLEMIG-MIDPDNMPYIVFTTAYDEYAIKAFEEQAFDYLLKPIDPPRLTKTLRNLHRE-- 118

Query: 127 RNVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLY 186
               P+ ++ +L  Q   L          ++  +    I+L+  +E+ +  A  +   +Y
Sbjct: 119 ---RPAQNIDKLSDQQAGLD---------YIPCTGHSRIYLMKSSEVQF--ASSRQSGVY 164

Query: 187 KVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRL 246
            V G    E     +LK L ++       + HR  +VN+  + ++  +  G+  + +   
Sbjct: 165 -VTGPQGEECFTELTLKTLESR---TPLVRCHRQYLVNMDHLREIRLEESGQAEILLKSG 220

Query: 247 Q-LPVSR 252
           Q LPVSR
Sbjct: 221 QALPVSR 227