Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., Response regulator of the LytR/AlgR family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 96.7 bits (239), Expect = 4e-25
 Identities = 67/228 (29%), Positives = 119/228 (52%), Gaps = 29/228 (12%)

Query: 6   YTAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKM 65
           Y  ++ DDEP  R  L   ++++   LE+     NG+ A+  +++   D++ LDIRMP M
Sbjct: 3   YQILIVDDEPPARKLLIDYVSKVG-MLELAGVCSNGEEAMVFLKEKPVDILLLDIRMPLM 61

Query: 66  DGIEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQL 125
            G+++   L+++P   L +F+TAY+EYAV  +E   IDYL+KP+S  R     +K  + L
Sbjct: 62  TGMDLLDELVEKP---LTIFVTAYEEYAVKGYELDVIDYLMKPVSFERFRKAIDKAVEYL 118

Query: 126 RRNVAPSNDLAQLMSQF--EQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYL 183
              VA + +  +++  F  +  TR VK  ++                 E+  ++A+ +Y+
Sbjct: 119 SVQVA-TEEKREILDYFFIKTDTRIVKFLFE-----------------EIQAIEAQREYI 160

Query: 184 SLYKVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKV 231
            +       T + +   SL  +   L P +F +IHRS ++N+  ID+V
Sbjct: 161 KII----TPTRKVMSLVSLTSIANAL-PGEFVRIHRSFIINMRHIDEV 203