Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., Response regulator of the LytR/AlgR family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  112 bits (279), Expect = 1e-29
 Identities = 77/255 (30%), Positives = 136/255 (53%), Gaps = 18/255 (7%)

Query: 8   AVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDG 67
           A++ DDE L R  L  LL+ +   +E++  A N   A + I    PDV+FLDI+MP+  G
Sbjct: 3   ALVIDDERLARKELINLLSSI-DDVEVIGEAVNVDDAKEKISSLNPDVIFLDIQMPEKTG 61

Query: 68  IEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRR 127
            ++   L +   VP V+F TAYDE+A+ AFE +A+DYLLKP+  +RL+    KL+ +L+ 
Sbjct: 62  FDL---LSEMETVPDVIFTTAYDEFALKAFEVNALDYLLKPIEPARLSEAIAKLKNKLQN 118

Query: 128 NVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYK 187
           N   + D  ++  + E   + +    QV++K   G+    + +  +   +++  Y+ +Y 
Sbjct: 119 NADLTKDTEKVTIEGE---KKLSLNDQVFVK--DGDRCWFVKLENVRLFESDGNYIKVY- 172

Query: 188 VHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHI---D 244
                 ++ ++  SL  L  +LD   F++  R  ++N+  ++ +   F G + V +   D
Sbjct: 173 ---FENNKPMIHKSLNALDERLDEKSFFRASRKHIINLSWVEGIEPWFNGGLVVTLKGGD 229

Query: 245 RLQLPVSRALQHLFK 259
           R++  VSR     FK
Sbjct: 230 RIE--VSRRQAARFK 242