Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., Transcriptional regulatory protein YpdB from Acinetobacter radioresistens SK82

 Score =  125 bits (314), Expect = 8e-34
 Identities = 82/249 (32%), Positives = 140/249 (56%), Gaps = 17/249 (6%)

Query: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68
           ++ DDEPL    L++L+ +L     +VA+  +GQ  ++ ++Q+QPDVV LDI+MP+MDG+
Sbjct: 4   LICDDEPLAVERLSRLVTQL--GHHVVATTSSGQHTIELVQQYQPDVVLLDIQMPEMDGL 61

Query: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128
           + A +L Q   +P +VF TAY+++A+ AF++ A  YLLKP+  S L    ++L    R N
Sbjct: 62  QCAEQLNQLDLMPAIVFCTAYEDHALEAFKSSAEGYLLKPIEVSELQQVLDRL---TRLN 118

Query: 129 VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYKV 188
            A  + L Q      +L R      Q+  K+ +G  + L+ V  + Y  A+ KY+++   
Sbjct: 119 QAQMSGLKQKDIDTAKLQR-----QQITAKSYRG--VELVPVENIYYFLADQKYVTVRHK 171

Query: 189 HGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRLQL 248
           HG+     L+  +LKEL  +    +F +IHR+ +V+V  +D +     G+  V    L  
Sbjct: 172 HGS----ILIDETLKELEQEFS-EKFIRIHRNALVSVDYLDGLEVVTSGQYQVRCRELDE 226

Query: 249 PVSRALQHL 257
            ++ + +HL
Sbjct: 227 RLAVSRRHL 235