Pairwise Alignments

Query, 3263 a.a., type I secretion C-terminal target domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 515 a.a., Hemolysin-type calcium-binding region from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score = 57.8 bits (138), Expect = 6e-12
 Identities = 31/57 (54%), Positives = 36/57 (63%), Gaps = 2/57 (3%)

Query: 3118 TLLSGSGDDFVQGGAGDDVLVGGLGADILVGGTGADMFKWT--LDGVDDKVDHIRDF 3172
            TL  G+G+D ++G AGDDVL GGLGAD L GGTG D F +T   D      D I DF
Sbjct: 371  TLAGGAGNDILEGNAGDDVLTGGLGADKLTGGTGNDRFVFTSSADSHAGSSDLITDF 427



 Score = 57.4 bits (137), Expect = 8e-12
 Identities = 54/169 (31%), Positives = 72/169 (42%), Gaps = 20/169 (11%)

Query: 3024 PAGASLSSTAGSVTDLGNGRWEVSPDALESLKVVGLDEGVHTLSLTALSTESDGSSAPSA 3083
            PA   L  +A   + LGNG  +      E L+      G++ L     S E D +    A
Sbjct: 116  PAHDILDVSALGYSHLGNGYGDTLHIRSEPLR------GIYFLE----SYERDQNGHRFA 165

Query: 3084 NSIDYRIEIAADGSLLDHRSATDDSLLVAGNSGM-TLLSGSGDDFVQGGAGDDVLVGGLG 3142
                    +  D +L    + T  S L+ G  G  TL +G+G D V+ GA +D L GG G
Sbjct: 166  VQFLANSGVITDANLQPLINGTSQSNLLVGTDGSETLKAGAGRDTVEAGADNDRLFGGAG 225

Query: 3143 ADILVGGTGADMFKWT---------LDGVDDKVDHIRDFNVNEGDSIDL 3182
             D L GG GAD F +T           G     D I DF+ N  D ID+
Sbjct: 226  GDTLSGGAGADTFVYTRLSDSYRNDASGSYSSRDLITDFSGNGHDMIDV 274



 Score = 49.7 bits (117), Expect = 2e-09
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 10/82 (12%)

Query: 3110 LVAGNSGMTLLSGSGDDFVQGGAGDDVLVGGLGADILVGGTGADMFKWT------LDGVD 3163
            L  G +   L+ G G+D++  G G+DV+V G GAD L GG G D+F++       ++G  
Sbjct: 46   LRGGLANELLMGGDGNDYIVSGGGNDVMVPGAGADSLSGGAGNDVFRFERISDSYINGAG 105

Query: 3164 DKVDHIRDFNVNEGDSIDLIDV 3185
            +  D I  F+     + D++DV
Sbjct: 106  ESTDSISYFD----PAHDILDV 123