Pairwise Alignments
Query, 3263 a.a., type I secretion C-terminal target domain-containing protein from Vibrio cholerae E7946 ATCC 55056
Subject, 1391 a.a., hypothetical protein from Acinetobacter radioresistens SK82
Score = 62.8 bits (151), Expect = 5e-13
Identities = 298/1372 (21%), Positives = 481/1372 (35%), Gaps = 257/1372 (18%)
Query: 2030 GTWTITNEADFSIKAPNGLVYSS---NNDPDKNGFNDIKITITAK---VYDQGEDSSEVK 2083
G W++ N + S +V S N+ + D IT + V + S+ +
Sbjct: 66 GNWSVANPGNLSDGQQISVVASDAAGNSSAPASATVDADITAPSLEFIVIINTDGSATLS 125
Query: 2084 ITKQVSTELTL------SFPTEVTGNNSVAAQLNWVGDADDLVIGKEDNTVNLGQQIQDK 2137
T + +T+ + P VT + S++ + A D N
Sbjct: 126 GTTEPGASVTVRGPNGAAVPVTVTPDGSISGSIAAPALAGSYTATATDINGNTATDT--- 182
Query: 2138 LMVNATGFDAVADELSIVIN-------ASDLPAGASIGGQDFNFVDGHYVFKGTLNPDGS 2190
AT A EL++VIN + GAS+ Q DG V T+ P+GS
Sbjct: 183 --ATATDSTPPAVELNVVINTDGSATLSGTTEPGASVIVQG---PDGAVV-PVTVAPNGS 236
Query: 2191 ISGLEGLVLIPPRDFAGDFKLPITFVT----TDTQSGDEKTLTAQVPVAISPVADVPSS- 2245
ISG I AG++ T + TDT + + +AI +A +P S
Sbjct: 237 ISGS-----IAAPALAGNYTATATDINGNTATDTATDINGNTASGTAIAIDNIAPIPGSL 291
Query: 2246 ----------SGDQPLDNHVTPSITLNVQETLGLDANHQPTDLAND----TPTQDGIA-- 2289
S + N T ++TL QET TD N T Q G+A
Sbjct: 292 SLADFSDTGISLSDGISNDNTFNLTLTGQETGSTVVYQISTDGGNTWVATTAAQTGVADN 351
Query: 2290 -YE--------DGIVHLNLAIGLA-------------DSLNGSTQGQEVLTEVTLTLNDT 2327
Y+ +G + A+G+ DS NG+ V+ T + T
Sbjct: 352 TYQYRAVVTDVNGNSSITNAVGVTIDTITTVTARFALDSDNGNPDPTTVIVSGTAEVGST 411
Query: 2328 -----NSGV-FVDANGQSLGT-----------------------SITLTQAELPAALGEI 2358
N+GV VD G + T S+ T A +
Sbjct: 412 VTLTTNTGVAIVDNLGNPVSTIVGSTGTYTFNIPTVSVVDNQLLSVNSTDIAGNVATAPV 471
Query: 2359 YFKPAPNYPSGNDINTVGMTVTGKVTDSTVFDE-TNASLQGVSSSDADKTFTSQVSFEVK 2417
P P+ D + V + + ++T TV+ E T+ +Q + ++D + V+ V
Sbjct: 472 RIDLTP--PNAID-DVVNLDIVSQIT--TVYPEVTDTDVQVLGLLESDNGTDNGVTVIVG 526
Query: 2418 PVVDDITIGSGSPISVTGDEDSWIALADQGNAFNVSLNDNDGSEQFVSLVLTGLPTDFL- 2476
P V E S ALA +AF + + D +G+ + ++ L D L
Sbjct: 527 P----------DQFGVLNIEISQTALAAVADAFRLDVVDANGNVVYSAVTQNSLVGDVLG 576
Query: 2477 --VKSLSSDYV----VKNNGGGEWSVQIRNPNLTSLD---------LSALAIKPTKDFSG 2521
V ++ D V+ G + V +RN T D +S + + G
Sbjct: 577 LNVLGVTGDNTLTATVRGLQPGTYRVVVRNDESTLTDLLDSDNSGGVSLQELGNSGVILG 636
Query: 2522 EVQLGIKVFTQESLLGEPVEHTGQF-------TLNVTPIGDDVD-IAPITNVVGNEG--Q 2571
+ + T + LG + T TLN P+ + ++ + I N VG G
Sbjct: 637 PENQTLVLNTVSNALGPVLGPTVTTLLSPVLTTLNGLPVDEIINPLITILNNVGATGLLN 696
Query: 2572 AIDISLGAQILDKAPSLPGGVTYTENSPETLRVEISGVPDGAFLSLADGTLGTSLGGGVW 2631
+ SL +L +L T ET + GT G
Sbjct: 697 TVLSSLADALLSNTLTLLQATDITTQLTETDFANEALTGGNVITGAGSSNGGTDDAQGGV 756
Query: 2632 VFEINAQQLDKVVFNSGDNNQL--NWNGNLHFKVQSVDTGLA-GDQ-HLGSAQEFDVHV- 2686
+ ++ VV S +N G L T A GD +G ++ F +
Sbjct: 757 ITQVQIADGPIVVIPSNGSNVTVEGLYGVLTINSSGAYTYTAYGDPASIGGSEVFTYTLS 816
Query: 2687 DVTAVNDRPELINVQDQVTEEDTPLLLNSFTLADIDAQLDDPNADYTLQIGVNSGVLIID 2746
D V+ IN+ D T L+N ++ D D T V + V+
Sbjct: 817 DGNTVDTAKLTINIADTSTTAPRVTLVNDTGNSNTDLITQDGRIAVTADPDVTTVVVRYT 876
Query: 2747 SSLSSGLTIQGDGTGALSITGNVAEINAAIGAGLVKFVPSPDFYGQVAVTLNVNDNGNAG 2806
S+ +G+ + A + A G + P+ G VT V D N
Sbjct: 877 SASGTGVNVN-------------AVYDTATGRWIAT-PPAGFADGTYNVTATVTDTTNH- 921
Query: 2807 SEIAGDASTAHDNSAQFVIDVTAVNDKPEVDGIHLTAQIDEASGQKLTGITV--SDVDYA 2864
+ + + D + V V + ++ V G + I + + + G S +
Sbjct: 922 TNTSSLGNITVDTTPPVVTIVGSGDNAGNVQGNIYSGAITDDNTPTIFGRAAPNSTITLI 981
Query: 2865 GSHTNDVMKVTLSISEGILSVQAPAGSSVA--VSYALDGSVI-LEGSPEAINALLNHSDS 2921
+T+ S APA SS A V++ V G+ N LN
Sbjct: 982 QDGVTITTPITVDASGNWSYTPAPALSSSATGVNHTWQARVTDTAGNITTANFNLN---- 1037
Query: 2922 AYGLFVDATAIAGTQINLTVTAQDMGVYFENASGMA-LEESKTYPIQVNPVANAPSLSMN 2980
+ +A N +GV + +G+ L + N +++N
Sbjct: 1038 ---IIGQVAPVAAVNSNAL-----LGVVGADVAGLIDLNQQLFAAADANGDLRRVEITLN 1089
Query: 2981 PAFGYAQQIYANQSLSAQGIALLGAIAALTDLHETLSLRVDHLPAGASLSSTAGSVTDLG 3040
A + N S S G+A L T + V PA ++ + G V D
Sbjct: 1090 SAVSLGGE---NFSFST-GLANLFGYNVTTQSSQLALPLVPSRPARITIEAAQGQVLD-- 1143
Query: 3041 NGRWEVSPDALESLKVVG-LDEGVHTLSL----TALSTESDGSSAPSAN----SIDYR-- 3089
E++ + L S+K+ G L G+ L+L ++T+S GSS + S+D
Sbjct: 1144 --NQEIN-EFLASVKLSGSLLGGLLNLNLLNNLNVVATDSQGSSTSYSRGEIASVDLLGG 1200
Query: 3090 ---------IEIAADGSLLDHRSAT------------------DDSLLVAGNSGMTLLSG 3122
+E A+ ++L + ++T + +L+ GN TL +G
Sbjct: 1201 LLSGSASPIVEGNANANILGNSNSTVSQRLYGYDGNDTLNGGSGNDILLGGNGDDTLNAG 1260
Query: 3123 SGDDFVQGGAGDDVLVGGLGADILV----------GGTGADMFKWTLDGVDDKVDHIRDF 3172
+G+D++ GGAG+D + GG GAD +V GG G D WT D V +IR
Sbjct: 1261 AGNDYINGGAGNDTITGGPGADTVVFDLLVAANARGGNGTD--TWT----DFHVGNIR-- 1312
Query: 3173 NVNEGDSIDLIDVVQDLGNHLTMEQLLNNLSVSNQLTAQVVDNDVTLQVTTD 3224
N+ D ID+ D+ LG + NNL QL + VTL + D
Sbjct: 1313 TDNQADRIDVSDL---LGGEVN----ANNLGQYIQLNYNSTSSTVTLSIDRD 1357
Score = 49.3 bits (116), Expect = 6e-09
Identities = 187/823 (22%), Positives = 289/823 (35%), Gaps = 163/823 (19%)
Query: 507 GGGASLVAD--GNFTTTQGSDGVVSYRLDSLTDSVAGITSGGVAVTLSESVDANG----- 559
G AS VAD GN++ + ++ + AG +S + T+ + A
Sbjct: 55 GTTASTVADAAGNWSVANPGNLSDGQQISVVASDAAGNSSAPASATVDADITAPSLEFIV 114
Query: 560 --NYTYTATAGG--EPVFTLLLNQDGS----YRFTLQGSLDHALNSDELLVNFTVVATDF 611
N +AT G EP ++ + T GS+ ++ + L ++T ATD
Sbjct: 115 IINTDGSATLSGTTEPGASVTVRGPNGAAVPVTVTPDGSISGSIAAPALAGSYTATATDI 174
Query: 612 DGDTASITLPVTVKDDKPYFTNVTSLNVHENDLPQGSDVTKEPLTASGQFELVQGSDRVA 671
+G+TA+ T T D P LNV N T T G +VQG
Sbjct: 175 NGNTATDT--ATATDSTP---PAVELNVVIN---TDGSATLSGTTEPGASVIVQGP---- 222
Query: 672 SFTLDSSVNPVQGLTSNGVAVTLSAPVDDGHGNLTYTAMAGAVTVFTLTLNTDGTYSFTL 731
D +V PV + ++ +++AP G+ T T + G T T T S T
Sbjct: 223 ----DGAVVPVTVAPNGSISGSIAAPALAGNYTATATDINGNTATDTATDINGNTASGTA 278
Query: 732 AAPVDHALNSNDLTLNFQVIATDFDGDSDSIVLPVKINDDKPYFTNVQGLYVHENDLPQG 791
A + A L+L D I L I++D + + G + Q
Sbjct: 279 IAIDNIAPIPGSLSL--------ADFSDTGISLSDGISNDNTFNLTLTGQETGSTVVYQI 330
Query: 792 SDTDKEPVTVNGQFQLVQGADTVASFALDSSVNPVQGLTSNGVAVTLSA--------PVD 843
S Q +T A+ + VN +T N V VT+ +D
Sbjct: 331 STDGGNTWVATTAAQTGVADNTYQYRAVVTDVNGNSSIT-NAVGVTIDTITTVTARFALD 389
Query: 844 DGNGN-------LTYTAMAGSVTVFTLT----------------LNSDGTYSFTLAAPVE 880
NGN ++ TA GS T + S GTY+F + P
Sbjct: 390 SDNGNPDPTTVIVSGTAEVGSTVTLTTNTGVAIVDNLGNPVSTIVGSTGTYTFNI--PTV 447
Query: 881 HALNSDSLTLNFKVIATDFDGDTAS--------------------IVLPVTVLDDQPSVI 920
+++ L++N +TD G+ A+ IV +T + + +
Sbjct: 448 SVVDNQLLSVN----STDIAGNVATAPVRIDLTPPNAIDDVVNLDIVSQITTVYPEVTDT 503
Query: 921 SAQALSVNEDDLAT--------GTDQSKESTTANGQFTTTQGADGIAHYQIDTSTSSNTG 972
Q L + E D T G DQ Q AD +D + +
Sbjct: 504 DVQVLGLLESDNGTDNGVTVIVGPDQFGVLNIEISQTALAAVADAFRLDVVDANGNVVYS 563
Query: 973 LTSQGQPV----------VWGAPSITTTSSG-QVYTYQGIA-NGVVIFTLVLRADGSYSF 1020
+Q V V G ++T T G Q TY+ + N T +L +D S
Sbjct: 564 AVTQNSLVGDVLGLNVLGVTGDNTLTATVRGLQPGTYRVVVRNDESTLTDLLDSDNSGGV 623
Query: 1021 TL-----NGAVDHPLNANELTLNI------PVLAQDADGDTSPI--TLPVTIVDD----- 1062
+L +G + P N L LN PVL SP+ TL VD+
Sbjct: 624 SLQELGNSGVILGPEN-QTLVLNTVSNALGPVLGPTVTTLLSPVLTTLNGLPVDEIINPL 682
Query: 1063 VPILHDKNIALQEGSVASSVNLFSRDNNLSPDTQGADRGVITHFSAVDEAGRDIQFREGS 1122
+ IL++ +V SS+ N L+ Q D + T + D A + G+
Sbjct: 683 ITILNNVGATGLLNTVLSSLADALLSNTLTL-LQATD--ITTQLTETDFANEAL--TGGN 737
Query: 1123 VLSNDIELNGAAK-----TVTVVEIVNG-------------VSRDLGTLTIQPNGTATFT 1164
V++ NG +T V+I +G V G LTI +G T+T
Sbjct: 738 VITGAGSSNGGTDDAQGGVITQVQIADGPIVVIPSNGSNVTVEGLYGVLTINSSGAYTYT 797
Query: 1165 PVTQLDHTDGNDIKFTVDVTATDYDHDTSTEQLNITIYDHKAT 1207
G+++ FT T +D + T +L I I D T
Sbjct: 798 AYGDPASIGGSEV-FT--YTLSD-GNTVDTAKLTINIADTSTT 836
Score = 45.8 bits (107), Expect = 7e-08
Identities = 107/483 (22%), Positives = 186/483 (38%), Gaps = 71/483 (14%)
Query: 2070 AKVYDQGEDSSEVKITKQVSTELTLSFPTEVTGNNSVAAQLNW-VGDADDLVIGKEDNTV 2128
A + D + + T + + +++P T + A NW V + +L G++ + V
Sbjct: 26 APLLDAVNATDPISGTAEAGARIVVTYPNGTTASTVADAAGNWSVANPGNLSDGQQISVV 85
Query: 2129 NLGQQIQDKLMVNAT---GFDAVADELSIVIN-------ASDLPAGASIGGQDFNFVDGH 2178
+AT A + E ++IN + GAS+ + N
Sbjct: 86 ASDAAGNSSAPASATVDADITAPSLEFIVIINTDGSATLSGTTEPGASVTVRGPNGA--- 142
Query: 2179 YVFKGTLNPDGSISGLEGLVLIPPRDFAGDFKLPITFVTTDTQSGDEKTLTAQVPVAISP 2238
T+ PDGSISG I AG + T + +T + D T T P A+
Sbjct: 143 -AVPVTVTPDGSISGS-----IAAPALAGSYTATATDINGNTAT-DTATATDSTPPAVE- 194
Query: 2239 VADVPSSSGDQPLDNHVTPSITLNVQETLGLDANHQPTDLANDTPTQDGIAYEDGIVHLN 2298
+ V ++ G L P ++ VQ G D P +A +
Sbjct: 195 LNVVINTDGSATLSGTTEPGASVIVQ---GPDGAVVPVTVAPN----------------- 234
Query: 2299 LAIGLADSLNGSTQGQEVLTEVTLTLNDTNSGVFVDA----NGQSL-GTSITLTQ-AELP 2352
S++GS + T T D N D NG + GT+I + A +P
Sbjct: 235 ------GSISGSIAAPALAGNYTATATDINGNTATDTATDINGNTASGTAIAIDNIAPIP 288
Query: 2353 AALGEIYFKPAPNYPS---GNDINTVGMTVTGKVTDSTVFDE--TNASLQGVSSSDADKT 2407
+L F S ND NT +T+TG+ T STV + T+ V+++ A +T
Sbjct: 289 GSLSLADFSDTGISLSDGISND-NTFNLTLTGQETGSTVVYQISTDGGNTWVATT-AAQT 346
Query: 2408 FTSQVSFEVKPVVDDITIGSG--SPISVTGDEDSWIAL-----ADQGNAFNVSLNDNDGS 2460
+ +++ + VV D+ S + + VT D + + +D GN ++ + +
Sbjct: 347 GVADNTYQYRAVVTDVNGNSSITNAVGVTIDTITTVTARFALDSDNGNPDPTTVIVSGTA 406
Query: 2461 EQFVSLVLTGLPTDFLVKSLSSDYVVKNNGGGEWSVQIRNPNLTSLDLSALAIKPTKDFS 2520
E ++ LT +V +L + G ++ I P ++ +D L++ T D +
Sbjct: 407 EVGSTVTLTTNTGVAIVDNLGNPVSTIVGSTGTYTFNI--PTVSVVDNQLLSVNST-DIA 463
Query: 2521 GEV 2523
G V
Sbjct: 464 GNV 466
Score = 35.4 bits (80), Expect = 9e-05
Identities = 94/416 (22%), Positives = 152/416 (36%), Gaps = 74/416 (17%)
Query: 170 QTLV-NPLRFAAG---GESLSTQVTEGSLSLGTYPQTSTVTSLIT----AGSLALLPA-- 219
QTLV N + A G G +++T ++ +L P + LIT G+ LL
Sbjct: 640 QTLVLNTVSNALGPVLGPTVTTLLSPVLTTLNGLPVDEIINPLITILNNVGATGLLNTVL 699
Query: 220 SFVPEAAFLTSLLAELNQDITSSGQPVVFRYDAATNSII----GEQNGSTVLSIAISAES 275
S + +A +L DIT+ F +A T + G NG T
Sbjct: 700 SSLADALLSNTLTLLQATDITTQLTETDFANEALTGGNVITGAGSSNGGT---------D 750
Query: 276 IGRDVNLTITTTLSQPIDHLPSVGG-----GLVSISGDQISIALQLTGTDSNGNVIQAPI 330
+ +T PI +PS G GL + S A T ++ + +
Sbjct: 751 DAQGGVITQVQIADGPIVVIPSNGSNVTVEGLYGVLTINSSGAYTYTAYGDPASIGGSEV 810
Query: 331 DVVVAINDGSAPVMVDEPTLSLNENDLPAGSDGADPLTVSGQFDTQL-GSDQVASYQIDP 389
++DG+ VD L++N D + + +G +T L D + DP
Sbjct: 811 -FTYTLSDGNT---VDTAKLTINIADTSTTAPRVTLVNDTGNSNTDLITQDGRIAVTADP 866
Query: 390 STANPIAGLTSQGDAVILGEPTLIDGNRVYQATAGGRDIFQLTLN-ADGSYQFVLQGTLD 448
+ TS T ++ N VY TA GR I ADG+Y
Sbjct: 867 DVTTVVVRYTSASG-------TGVNVNAVYD-TATGRWIATPPAGFADGTYN-------- 910
Query: 449 HAAGSDALTISLPIVAIDYDNDSSAPGNLNIEIQDDKPIIIGAEQLTVAEQTLDTGSIGG 508
++ + ++S+ GN+ ++ I+G+ Q G+I
Sbjct: 911 ---------VTATVTDTTNHTNTSSLGNITVDTTPPVVTIVGSGDNAGNVQ----GNIYS 957
Query: 509 GASLVADGNFTTTQGSDGVVSYRLDSLTDSVAGITSGGVAVTLSESVDANGNYTYT 564
GA + D N T G + +S + GV +T +VDA+GN++YT
Sbjct: 958 GA--ITDDNTPTIFGR---------AAPNSTITLIQDGVTITTPITVDASGNWSYT 1002
Score = 33.5 bits (75), Expect = 4e-04
Identities = 87/396 (21%), Positives = 151/396 (38%), Gaps = 66/396 (16%)
Query: 2883 LSVQAPAGSSVAVSYALDGSVILEGSPEAINALLNHSDSAYGLFVDATAIAGTQINLTVT 2942
++V+ P G++V V+ DGS+ GS A +++ +A + + T + T
Sbjct: 134 VTVRGPNGAAVPVTVTPDGSI--SGSIAAPALAGSYTATATDINGNTATDTATATDSTPP 191
Query: 2943 AQDMGVYFENASGMALEESKTYP-----IQ-----VNPVANAPSLSMNPAFGYAQQIYAN 2992
A ++ V N G A T P +Q V PV AP+ S++ + A + N
Sbjct: 192 AVELNVVI-NTDGSATLSGTTEPGASVIVQGPDGAVVPVTVAPNGSISGSIA-APALAGN 249
Query: 2993 QSLSAQGIALLGAIAALTDLH----ETLSLRVDH---LPAGASLSSTAGSVTDLGNGRWE 3045
+ +A I A TD++ ++ +D+ +P SL+ + + L +G
Sbjct: 250 YTATATDINGNTATDTATDINGNTASGTAIAIDNIAPIPGSLSLADFSDTGISLSDG--- 306
Query: 3046 VSPDALESLKVVGLDEGVHTLSLTALSTESDGSSAPSANSIDYRIEIAADGSLLDHRSAT 3105
+S D +L + G + G S +DG + A + + + +R+
Sbjct: 307 ISNDNTFNLTLTGQETG----STVVYQISTDGGNTWVATT---AAQTGVADNTYQYRAVV 359
Query: 3106 DDSLLVAGNSGMTLLSGSGDDFVQGGAGDDVLVGGLG----ADILVGGTGADMFKWTLDG 3161
D V GNS +T G D + L G ++V GT
Sbjct: 360 TD---VNGNSSITNAVGVTIDTITTVTARFALDSDNGNPDPTTVIVSGTA---------- 406
Query: 3162 VDDKVDHIRDFNVNEGDSIDLIDVVQDLGNHLTMEQLLNNLSVSNQLTAQVVDNDVTLQV 3221
+V N G + +V +LGN ++ N T VVDN +
Sbjct: 407 ---EVGSTVTLTTNTG-----VAIVDNLGNPVSTIVGSTGTYTFNIPTVSVVDNQLL--- 455
Query: 3222 TTDNQVQQTIVIENLAT---QIDFTGMSSLDIIGTL 3254
V T + N+AT +ID T +++D + L
Sbjct: 456 ----SVNSTDIAGNVATAPVRIDLTPPNAIDDVVNL 487
Score = 32.3 bits (72), Expect = 8e-04
Identities = 52/220 (23%), Positives = 81/220 (36%), Gaps = 54/220 (24%)
Query: 1414 ENGANANLVYSDGSPIPTKTDANGTYYEV-PAN-----KIAQVQVDPADNFAGQIKLDVT 1467
E GA + Y +G+ T DA G + P N +I+ V D A N + V
Sbjct: 43 EAGARIVVTYPNGTTASTVADAAGNWSVANPGNLSDGQQISVVASDAAGNSSAPASATVD 102
Query: 1468 A-ITKESTNYVA-----GKQTAQSETKE-------------IVIDVAPEAD--------- 1499
A IT S ++ G T T+ + + V P+
Sbjct: 103 ADITAPSLEFIVIINTDGSATLSGTTEPGASVTVRGPNGAAVPVTVTPDGSISGSIAAPA 162
Query: 1500 -RGSFTVNRISI----FEDNASNQNAVDPSVEHDPLLLSEVISMTGSSDADGSEALFVRL 1554
GS+T I D A+ ++ P+VE L+ VI+ GS+ G+
Sbjct: 163 LAGSYTATATDINGNTATDTATATDSTPPAVE-----LNVVINTDGSATLSGT------- 210
Query: 1555 SDFTDTGATLVWLGSGPSPITVGTYPNGETYYEIPQSALS 1594
T+ GA+++ G + + V PNG I AL+
Sbjct: 211 ---TEPGASVIVQGPDGAVVPVTVAPNGSISGSIAAPALA 247