Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  101 bits (251), Expect = 3e-26
 Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 10/171 (5%)

Query: 135 RNYTVILHESERDKLTGLLNRRTLEDRLRHTFAINPSTEENHKLWIAMLDIDHFKAINDH 194
           R +T   + + RD LTG LNRR L D  R  FA      +   + + M+D+DHFKA+ND 
Sbjct: 217 RVHTEFEYMATRDSLTGALNRRALLDACRGAFA-----SDRRHMALLMVDLDHFKAVNDR 271

Query: 195 FGHMIGDEILLMFAQQMQHYFGPSSQLFRFGGEEFVIIFSSGNEPQIKQQLDGFRQQIRR 254
           FGH +GD++L    ++MQ   G +  L R+GGEEFV++     + +        +Q I  
Sbjct: 272 FGHQMGDKVLREAVRRMQRAVGDAGVLGRYGGEEFVVLLPGTGKVEAMAIAARLKQAIGE 331

Query: 255 HNFP-----RIGELSFSAGFCSLRPGDYLPTILDHADKALYYAKEHGRNQV 300
              P      +G ++ S G  +   G  +  +L  AD ALY AK  GR+QV
Sbjct: 332 PFAPDSPMAEVGSIAVSIGVAASDGGRGVDEVLARADAALYKAKAMGRDQV 382