Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  152 bits (385), Expect = 9e-42
 Identities = 102/333 (30%), Positives = 167/333 (50%), Gaps = 32/333 (9%)

Query: 3   DKVLESVIEITEQKNSLALSYSILATLSELLPLSTATLFHHLGRSTLMVARLIITKNAAG 62
           + +L SV+ +TEQ++   L   + ATL+EL  L    +   +  +  +      ++++ G
Sbjct: 12  ESILSSVVLLTEQRSQKHLEDCLTATLAELAALPFCGICTPMPTANGIFIDWAASRSSGG 71

Query: 63  KKEYQWQYDQV--------CADNGYQHSQSEMAFSQQANGQYQCFCPIPIEEHFSAELCL 114
                 +  ++        C   G + S++       A+   +   P+ +++       L
Sbjct: 72  SAPSD-ELQEIGTDPLLLDCMALGTERSET------MADDSIRRAHPV-VDDRGKVCAFL 123

Query: 115 ILNKDP---EPYRMLINGFAKIYRNYTVILHESERDKLTGLLNRRTLEDRL-------RH 164
           +   +P   EP   LI GF  IYRNY  +L ++ RD LTGL NR+T ++         RH
Sbjct: 124 VTRTNPGQTEP-EALIKGFVAIYRNYLTVLWDAARDTLTGLKNRKTFDENFSSIVLESRH 182

Query: 165 T-FAINPSTEENH----KLWIAMLDIDHFKAINDHFGHMIGDEILLMFAQQMQHYFGPSS 219
              + N +  E H      W+ ++DID FKAIND  GH+ GDE+LL+ +  M+  F    
Sbjct: 183 IDVSFNGNRREAHLDGQHHWLGIIDIDRFKAINDTHGHVFGDEVLLLLSALMRKAFRSED 242

Query: 220 QLFRFGGEEFVIIFSSGNEPQIKQQLDGFRQQIRRHNFPRIGELSFSAGFCSLRPGDYLP 279
           +LFRFGGEEFV++ +       +   + FR  +    FP +  ++ SAGF  +   D   
Sbjct: 243 KLFRFGGEEFVVLLAPTTFSAAQAVFERFRATVAAFAFPEVERITVSAGFVRIDCDDLPS 302

Query: 280 TILDHADKALYYAKEHGRNQVHCYEQLCENGKI 312
            ++ +AD+ALYYAK HGR+QV  +EQL   G++
Sbjct: 303 VVIGNADRALYYAKAHGRDQVRSFEQLVAEGEL 335