Pairwise Alignments

Query, 414 a.a., L-methionine/branched-chain amino acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 82/341 (24%), Positives = 139/341 (40%), Gaps = 42/341 (12%)

Query: 32  IAAGIAGVFSLW-------AWLLLFVAICPIALTF-------AQLGKRYPNAGGTAYFVR 77
           + A I+G FS W        W  +F+A   IA+ +       A++    P+ G    F R
Sbjct: 38  VGAVISGHFSGWNLGIASGGWGGMFIAAVIIAIMYLGLTFSIAEMSPALPHTGAAYSFAR 97

Query: 78  QAFNPRLERAVAWLFLSVIPVGVPAAV-TLAASFLQALLPAPLANPLLTQTLTILLLVGV 136
               P     V  L  +V  V  PA V +   S++ ++   P A   +      ++ VG+
Sbjct: 98  TTMGP-WGGFVTGLCENVEYVITPAVVVSFIGSYMGSIFGTPPAFQPVYWIFGYIIFVGL 156

Query: 137 NLAGTKSSGRLQTLIALAIFSLVIAFW-----------WRGEVTT-QDLVMPALTQEGW- 183
           N+AG + S R+  ++ LA  + ++AFW           W   +    D     L   G  
Sbjct: 157 NIAGVELSFRVTLVVTLAALACLVAFWVSAIPVANFSRWALNIGVGPDGTAVELPNGGGP 216

Query: 184 ---VSIGAALAVM---FWCFVGIEAFAHMGEEFRNPQRDFPLAILIGSFVAGLTYWACSV 237
                IG ALA +    W F+ IE      EE  +P+ D P  I++G  +A L   A  +
Sbjct: 217 FLPFGIGGALAALPFAVWLFLAIEQLPLAAEESVDPKTDMPKGIMLG--MATLIVSAFMI 274

Query: 238 VVLKFS-AFGTPQFDSGAIPWLS--DQLFGTRWAIMISVIGFLACFASLNLYTQSLARMV 294
           + L  S A G+    +   P L     ++G   A +++++  +   AS +    +  R +
Sbjct: 275 LWLNSSVANGSFGLSTSLEPLLDGFKAIYGDGLAKLLALVAVIGLIASFHTIIYAQGRQI 334

Query: 295 WAQARE-YRPESAIARVSIRGVPAHATLLVGVVLFASCFIG 334
           ++ +R  Y P         R  P H  ++ G ++     IG
Sbjct: 335 YSLSRAGYFPRGLSVTHGGRKTP-HVAMVAGALVGLVIMIG 374